|
| Status |
Public on Jun 14, 2010 |
| Title |
Subject 199 |
| Sample type |
RNA |
| |
|
| Source name |
primary peripheral blood CD4+ lymphocytes
|
| Organism |
Homo sapiens |
| Characteristics |
subject: Subject 199
disease state: asthma
tissue: peripheral blood
cell type: CD4+ lymphocyte
age_at_blooddraw: 18
sex: F
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was extracted using the RNeasy Mini Protocol
|
| Label |
biotin
|
| Label protocol |
Standard Illumina label protcol
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Description |
S199
|
| Data processing |
Arrays were read using the BeadArray scanner (Illumina) and analyzed using BeadStudio (version 3.1.7) without background correction. Raw expression intensities were processed using the lumi package with background adjustment with RMA convolution of each array followed by VSN normalization.
|
| |
|
| Submission date |
Jun 14, 2010 |
| Last update date |
Jun 14, 2010 |
| Contact name |
Benjamin A Raby |
| Organization name |
Channing Laboratory
|
| Street address |
181 Longwood Avenue
|
| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02115 |
| Country |
USA |
| |
|
| Platform ID |
GPL6104 |
| Series (1) |
| GSE22324 |
Mapping of disease-associated expression polymorphisms in primary peripheral blood CD4+ lymphocytes |
|
