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Sample GSM544229 Query DataSets for GSM544229
Status Public on May 19, 2010
Title KUCaP2_AD_1
Sample type RNA
 
Source name Xenograft tissue
Organism Homo sapiens
Characteristics tissue type: Human prostate cancer xenograft
stage: androgen-dependent growth
Extracted molecule total RNA
Extraction protocol Xenograft tissues of KUCaP-2 were collected during various stages and total RNA was isolated and purified using the RNeasy Mini Kit (Qiagen)
Label biotin
Label protocol According to Affymetrix protocol
 
Hybridization protocol According to Affymetrix protocol
Scan protocol According to Affymetrix protocol
Description KUCaP2_AD_1
Data processing We used 'RMA' processing algorithm on 'R/Bioconductor'.
 
Submission date May 18, 2010
Last update date May 18, 2010
Contact name Naoki Terada
E-mail(s) [email protected]
Organization name Naoki Terada
Department Department of Urology
Lab Kyoto University
Street address 54, Shogoinkawahara-cho, Sakyo-ku
City Kyoto
ZIP/Postal code 606-8501
Country Japan
 
Platform ID GPL570
Series (1)
GSE21887 Identification of EP4 as a Potential Target for the Treatment of Castration-Resistant Prostate Cancer Using a Novel Xenograft Model

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1007_s_at 9.934917405
1053_at 8.647410691
117_at 4.845823993
121_at 8.488757469
1255_g_at 3.55626863
1294_at 5.387262478
1316_at 5.539189568
1320_at 4.910260533
1405_i_at 3.313743219
1431_at 3.726738191
1438_at 6.759447209
1487_at 8.352283336
1494_f_at 5.378279746
1552256_a_at 8.990571203
1552257_a_at 9.687328454
1552258_at 3.734709463
1552261_at 5.592873579
1552263_at 3.801655389
1552264_a_at 6.423723875
1552266_at 4.094808888

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM544229.CEL.gz 4.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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