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Sample GSM532835 Query DataSets for GSM532835
Status Public on Apr 24, 2010
Title type 2 diabetes 2
Sample type RNA
 
Source name blood
Organism Homo sapiens
Characteristics patient type: type 2 diabetes 2
gender: male
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing The signal intensity was background subtracted and subsequently used for analysis
 
Submission date Apr 13, 2010
Last update date Apr 23, 2010
Contact name Kandiah Jeyaseelan
E-mail(s) [email protected]
Organization name National University of Singapore
Department Biochemistry
Street address 8 Medical Drive
City Singapore
ZIP/Postal code 117597
Country Singapore
 
Platform ID GPL6883
Series (2)
GSE21321 Blood microRNA profiles and upregulation of hsa-miR-144 in males with type 2 diabetes mellitus.
GSE26168 Type 2 Diabetes mellitus: mRNA and miRNA profiling

Data table header descriptions
ID_REF
VALUE background subtracted signal value
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1809034 -5.7 0.76198
ILMN_1660305 81.6 0
ILMN_1762337 -3.7 0.66924
ILMN_2055271 18.6 0.01391
ILMN_1814316 -4.4 0.70788
ILMN_2359168 11.1 0.0881
ILMN_1731507 -14.5 0.983
ILMN_1787689 11 0.09119
ILMN_1745607 -2.6 0.61824
ILMN_2136495 1.5 0.39104
ILMN_1668111 -8.1 0.86862
ILMN_2295559 -1.3 0.54405
ILMN_1735045 4.6 0.24884
ILMN_1680754 5.3 0.22566
ILMN_2375184 4.4 0.25657
ILMN_1659452 12.6 0.06491
ILMN_1767388 12.6 0.06646
ILMN_1675204 -18.9 0.99691
ILMN_1673870 -4.1 0.69397
ILMN_1755321 33.6 0

Total number of rows: 24526

Table truncated, full table size 554 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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