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Sample GSM532830 Query DataSets for GSM532830
Status Public on Apr 24, 2010
Title impaired fasting glucose 4
Sample type RNA
 
Source name blood
Organism Homo sapiens
Characteristics patient type: impaired fasting glucose 4
gender: male
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 4
Data processing The signal intensity was background subtracted and subsequently used for analysis
 
Submission date Apr 13, 2010
Last update date Apr 23, 2010
Contact name Kandiah Jeyaseelan
E-mail(s) [email protected]
Organization name National University of Singapore
Department Biochemistry
Street address 8 Medical Drive
City Singapore
ZIP/Postal code 117597
Country Singapore
 
Platform ID GPL6883
Series (2)
GSE21321 Blood microRNA profiles and upregulation of hsa-miR-144 in males with type 2 diabetes mellitus.
GSE26168 Type 2 Diabetes mellitus: mRNA and miRNA profiling

Data table header descriptions
ID_REF
VALUE background subtracted signal value
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1809034 24.7 0
ILMN_1660305 73.5 0
ILMN_1762337 -11.5 0.94599
ILMN_2055271 10 0.1034
ILMN_1814316 -7.6 0.83488
ILMN_2359168 -1 0.51235
ILMN_1731507 -7.2 0.8179
ILMN_1787689 6.3 0.1821
ILMN_1745607 4.9 0.22377
ILMN_2136495 -2.6 0.59722
ILMN_1668111 -4.6 0.69907
ILMN_2295559 0.8 0.39352
ILMN_1735045 -5.9 0.75772
ILMN_1680754 9.2 0.11574
ILMN_2375184 16.8 0.01698
ILMN_1659452 10.6 0.09105
ILMN_1767388 12.4 0.06481
ILMN_1675204 -9.5 0.89661
ILMN_1673870 -9.9 0.90741
ILMN_1755321 40.9 0

Total number of rows: 24526

Table truncated, full table size 553 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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