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Sample GSM532824 Query DataSets for GSM532824
Status Public on Apr 24, 2010
Title control 6
Sample type RNA
 
Source name blood
Organism Homo sapiens
Characteristics patient type: control 6
gender: male
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate6
Data processing The signal intensity was background subtracted and subsequently used for analysis
 
Submission date Apr 13, 2010
Last update date Apr 23, 2010
Contact name Kandiah Jeyaseelan
E-mail(s) [email protected]
Organization name National University of Singapore
Department Biochemistry
Street address 8 Medical Drive
City Singapore
ZIP/Postal code 117597
Country Singapore
 
Platform ID GPL6883
Series (2)
GSE21321 Blood microRNA profiles and upregulation of hsa-miR-144 in males with type 2 diabetes mellitus.
GSE26168 Type 2 Diabetes mellitus: mRNA and miRNA profiling

Data table header descriptions
ID_REF
VALUE background subtracted signal value
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1809034 4.8 0.3231
ILMN_1660305 139.4 0
ILMN_1762337 2.7 0.3748
ILMN_2055271 33.5 0.03554
ILMN_1814316 -6.4 0.66559
ILMN_2359168 -9.3 0.74798
ILMN_1731507 -1.6 0.50081
ILMN_1787689 39.4 0.00646
ILMN_1745607 19.6 0.10016
ILMN_2136495 -13.4 0.84814
ILMN_1668111 -11.8 0.81422
ILMN_2295559 -10.6 0.78029
ILMN_1735045 -14.3 0.86591
ILMN_1680754 41.5 0
ILMN_2375184 29.2 0.0517
ILMN_1659452 1 0.41519
ILMN_1767388 17.5 0.12439
ILMN_1675204 -19.1 0.94023
ILMN_1673870 -4.2 0.58158
ILMN_1755321 18.5 0.11309

Total number of rows: 24526

Table truncated, full table size 567 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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