NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM532822 Query DataSets for GSM532822
Status Public on Apr 24, 2010
Title control 4
Sample type RNA
 
Source name blood
Organism Homo sapiens
Characteristics patient type: control 4
gender: male
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate4
Data processing The signal intensity was background subtracted and subsequently used for analysis
 
Submission date Apr 13, 2010
Last update date Apr 23, 2010
Contact name Kandiah Jeyaseelan
E-mail(s) [email protected]
Organization name National University of Singapore
Department Biochemistry
Street address 8 Medical Drive
City Singapore
ZIP/Postal code 117597
Country Singapore
 
Platform ID GPL6883
Series (2)
GSE21321 Blood microRNA profiles and upregulation of hsa-miR-144 in males with type 2 diabetes mellitus.
GSE26168 Type 2 Diabetes mellitus: mRNA and miRNA profiling

Data table header descriptions
ID_REF
VALUE background subtracted signal value
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1809034 5.5 0.28665
ILMN_1660305 72.2 0
ILMN_1762337 -8.9 0.71661
ILMN_2055271 17 0.13681
ILMN_1814316 -20.7 0.97883
ILMN_2359168 -10.4 0.77362
ILMN_1731507 10.3 0.21661
ILMN_1787689 24.8 0.06515
ILMN_1745607 -1 0.44463
ILMN_2136495 -12.2 0.82899
ILMN_1668111 -8 0.68893
ILMN_2295559 -5 0.59283
ILMN_1735045 -0.3 0.42671
ILMN_1680754 100.5 0
ILMN_2375184 2.9 0.35016
ILMN_1659452 7.2 0.25733
ILMN_1767388 1.5 0.38925
ILMN_1675204 -11.9 0.81759
ILMN_1673870 -10.4 0.77362
ILMN_1755321 26.5 0.05537

Total number of rows: 24526

Table truncated, full table size 567 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap