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Sample GSM518506 Query DataSets for GSM518506
Status Public on Jun 16, 2010
Title 4823936053_J
Sample type RNA
 
Source name human primary adult adrenal cells
Organism Homo sapiens
Characteristics agent: ACTH
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN Rneasy plus mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description triplicate 2 (ACTH)
Data processing The raw data is generated through GenomeStudio software. The raw data were normalised using quantile normalisation with IlluminaGUI in R. Genespring 11 software was used for subsequent data analysis.
 
Submission date Mar 08, 2010
Last update date Mar 08, 2010
Contact name yewei xing
E-mail(s) [email protected]
Phone 7067218779
Fax 7067218360
Organization name Medical College of Georgia
Department Physiology
Street address 1120 15th street
City Augusta
State/province GA
ZIP/Postal code 30912
Country USA
 
Platform ID GPL6947
Series (2)
GSE20669 Genome-wide analysis of adult adrenocortical cells gene expression after 48 h ACTH treatment
GSE20676 Genome-wide analysis of adrenocortical cells gene expression after 48 h ACTH treatment

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1910180 1.3156388 0.25955
ILMN_1725881 -0.20092273 0.90119
ILMN_1804174 -0.44810534 0.88933
ILMN_1796063 0.54790044 0.67852
ILMN_1811966 -0.3438363 0.86298
ILMN_1668162 -0.1789701 0.72464
ILMN_1715600 -0.3607769 0.93281
ILMN_1912287 0.07914567 0.5863
ILMN_1889125 -0.23107529 0.09486
ILMN_1793729 0.2775588 0.68248
ILMN_2296644 -0.016388655 0.95652
ILMN_1711283 -0.29170728 0.08696
ILMN_1682799 -1.3973422 0.02899
ILMN_1909767 -0.057005167 0.5415
ILMN_1840770 -0.16881609 0.6166
ILMN_1906209 -0.06926298 0.60211
ILMN_1665311 -0.13169861 0.57049
ILMN_1657235 -0.0703156 1
ILMN_1655444 0.47131753 0.62451
ILMN_1656744 -0.28373337 0.31621

Total number of rows: 48803

Table truncated, full table size 1493 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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