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GEO accession:
Sample GSM49902
Query DataSets for GSM49902
Status
Public on Dec 13, 2006
Title
08.mus.brain
Sample type
RNA
Channel 1
Source name
C57BL6 brain (pool of 9 individuals)
Organism
Mus musculus
Extracted molecule
total RNA
Channel 2
Source name
Mus musculus domesticus brain
Organism
Mus musculus
Extracted molecule
total RNA
Description
gene expression in house mice, expression divergence in house mice in 3 tissues (brain, liver/kidney, testis)
Submission date
Apr 29, 2005
Last update date
Dec 13, 2006
Contact name
Christian Robert Voolstra
E-mail(s)
[email protected]
URL
http://faculty.kaust.edu.sa/sites/christianvoolstra/Pages/home.aspx
Organization name
King Abdullah University of Science and Technology
Street address
Red Sea Research Center
City
Thuwal
ZIP/Postal code
23955
Country
Saudi Arabia
Platform ID
GPL1942
Series (1)
GSE2597
Contrasting patterns of expression divergence in early and late stages of population divergence in mice
Data table header descriptions
ID_REF
IA
intensity for alexa dye555 (cy3) reference channel
IB
intensity for alexa dye647 (cy5) sample channel
VALUE
normalized (lowess print-tip sd regularization print-tip) log2 ratio (IB / IA)
FlagA
Flag for Channel A (A/B/C=good,X/Y/Z=bad)
FlagB
Flag for Channel B (A/B/C=good,X/Y/Z=bad)
Data table
ID_REF
IA
IB
VALUE
FlagA
FlagB
1
71717
60855
-0.236939337
X
X
2
60856
61899
0.024516592
X
X
3
51506
45573
-0.176561159
C
C
4
48026
46400
-0.049690849
C
C
5
35468
34939
-0.021679664
X
X
6
60125
60227
0.002445409
X
X
7
69042
64064
-0.107960378
B
X
8
0
0
null
Z
Z
9
74922
73731
-0.023118088
B
B
10
94380
88737
-0.088945392
B
B
11
59617
57142
-0.061172247
X
X
12
70653
68287
-0.049139866
X
X
13
49017
54011
0.13997107
X
X
14
54306
47899
-0.181116066
X
X
15
60230
61956
0.040761745
X
X
16
56018
61282
0.129572906
X
X
17
70910
71446
0.010864146
X
X
18
62730
53321
-0.234451725
X
X
19
72192
67042
-0.106773785
X
X
20
63444
57120
-0.151487753
X
X
Total number of rows:
46128
Table truncated, full table size
1517 Kbytes
.
Supplementary data files not provided
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