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Sample GSM480894 Query DataSets for GSM480894
Status Public on Jun 08, 2014
Title Patient 3_OSCC
Sample type RNA
 
Source name OSCC
Organism Homo sapiens
Characteristics gender: Male
age: 75
Extracted molecule total RNA
Extraction protocol Total RNA was prepared from tissue using mirVana miRNA Isolation Kit (Ambion Inc.) in compliance with the manufacturer's protocol.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Hybridization signals were detected and quantified using Illumina scanner and BeadStudio version 3.2.7.
Description 240B
Data processing The data were normalised using quantile normalisation with IlluminaGUI in R
 
Submission date Dec 08, 2009
Last update date Oct 04, 2023
Contact name Patricia Severino
E-mail(s) [email protected]
Phone 5511984661282
Organization name Hospital Israelita Albert Einstein
Department Albert Einstein Research and Education Institute
Street address Rua Comendador Elias Jafet, 755
City Sao Paulo
State/province Sao Paulo
ZIP/Postal code 05653-000
Country Brazil
 
Platform ID GPL9770
Series (1)
GSE31277 MicroRNA expression profile in Head and Neck Cancer: HOX-cluster embedded microRNA-196 and microRNA-10b dysregulation is implicated in cell proliferation

Data table header descriptions
ID_REF
VALUE Quantile normalized

Data table
ID_REF VALUE
HS_1 8.040594829
HS_10 8.300326744
HS_100 15.13951773
HS_101 8.057374153
HS_104 8.253468528
HS_107 8.362455282
HS_108.1 9.645297677
HS_109 8.552318975
HS_11.1 8.250877745
HS_110 9.148861169
HS_111 8.336519747
HS_112 8.231378668
HS_113 10.76840174
HS_114 9.071542077
HS_116 9.719080038
HS_117 8.379346846
HS_119 8.855623978
HS_120 8.850247719
HS_121 8.463105319
HS_122.1 8.784910984

Total number of rows: 739

Table truncated, full table size 16 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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