NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM46892 Query DataSets for GSM46892
Status Public on Mar 31, 2005
Title Kidney - 23918
Sample type RNA
 
Source name Kidney
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.6
Patient Age: 40-50
Gender: Female
Ethnic Background: American Indian
Tobacco Use : Yes
Years of Tobacco Use: 16-20
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 1
Clinical T: 1a
Clinical N: 0
Clinical M: 0
Clinical Stage: 1
Clinical Grade: 1
Primary Site: Kidney
Histology: Conventional (clear cell) renal carcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) [email protected]
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 355.2 P 0.000581
AFFX-BioB-M_at 477.8 P 4.4e-005
AFFX-BioB-3_at 353.6 P 0.000127
AFFX-BioC-5_at 986.4 P 4.4e-005
AFFX-BioC-3_at 1404.3 P 4.4e-005
AFFX-BioDn-5_at 2827.4 P 4.4e-005
AFFX-BioDn-3_at 4258.5 P 5.2e-005
AFFX-CreX-5_at 10963.1 P 4.4e-005
AFFX-CreX-3_at 14700.8 P 4.4e-005
AFFX-DapX-5_at 196.2 P 0.00011
AFFX-DapX-M_at 1014.6 P 0.000754
AFFX-DapX-3_at 1954.9 P 4.4e-005
AFFX-LysX-5_at 77.1 P 0.001102
AFFX-LysX-M_at 147.6 P 0.010317
AFFX-LysX-3_at 464.2 P 0.000195
AFFX-PheX-5_at 47 P 0.013811
AFFX-PheX-M_at 190.6 P 0.000258
AFFX-PheX-3_at 254 P 9.5e-005
AFFX-ThrX-5_at 45.3 M 0.050229
AFFX-ThrX-M_at 160.5 P 6e-005

Total number of rows: 54675

Table truncated, full table size 1441 Kbytes.




Supplementary file Size Download File type/resource
GSM46892.CEL.gz 8.0 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap