GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM46831
Query DataSets for GSM46831
Status
Public on Mar 31, 2005
Title
Ovary - 1313
Sample type
RNA
Source name
Ovary
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Quality metric = 28S to 18S: 1.4
Patient Age: 70-80
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 6-10
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 4
Presenting Symptoms: Abdominal mass
Presenting Symptoms: Abdominal pain
Presenting Symptoms: Bloating
Pathological T: 3c
Pathological N: X
Pathological M: 1
Pathological Metastatic Sites: Pleura
Pathological Stage: 4
Pathological Grade: 3
Primary Site: Ovary
Histology: Papillary Serous Carcinoma
Submission date
Mar 31, 2005
Last update date
Aug 28, 2018
Contact name
Erin Curley
E-mail(s)
[email protected]
Phone
602-343-8808
Fax
602-343-8440
URL
http://www.intgen.org
Organization name
IGC
Department
Lab
expO
Street address
445 N. 5th Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85004
Country
USA
Platform ID
GPL570
Series (1)
GSE2109
Expression Project for Oncology (expO)
Relations
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
The name of the probe set, blank for control probes
VALUE
The signal value calculated by MAS5, normalized
ABS_CALL
The detection value calculated by the MAS5
DETECTION P-VALUE
The detection p-value calculated by the MAS5
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
1509.9
P
7e-005
AFFX-BioB-M_at
2461.5
P
4.4e-005
AFFX-BioB-3_at
1256.7
P
4.4e-005
AFFX-BioC-5_at
3886.8
P
4.4e-005
AFFX-BioC-3_at
4382.9
P
4.4e-005
AFFX-BioDn-5_at
10235.5
P
4.4e-005
AFFX-BioDn-3_at
16960
P
4.4e-005
AFFX-CreX-5_at
41550.4
P
4.4e-005
AFFX-CreX-3_at
48961
P
4.4e-005
AFFX-DapX-5_at
3
A
0.922034
AFFX-DapX-M_at
7.5
A
0.891041
AFFX-DapX-3_at
11.4
A
0.783476
AFFX-LysX-5_at
67
A
0.108979
AFFX-LysX-M_at
7.8
A
0.868639
AFFX-LysX-3_at
48.1
A
0.067678
AFFX-PheX-5_at
27
A
0.574038
AFFX-PheX-M_at
18.3
A
0.860538
AFFX-PheX-3_at
79
A
0.239063
AFFX-ThrX-5_at
8.8
A
0.699394
AFFX-ThrX-M_at
9.4
A
0.724854
Total number of rows:
54675
Table truncated, full table size
1447 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM46831.CEL.gz
7.9 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
