|
| Status |
Public on Nov 01, 2020 |
| Title |
cerebral organoid 1 |
| Sample type |
SRA |
| |
|
| Source name |
eCas9 ready cerebral organoid, 1
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: cerebral organoid
age: day40
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Accutase / Trypsin
10x, V2
|
| |
|
| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
NextSeq 550 |
| |
|
| Description |
73781
|
| Data processing |
10x genomics cell ranger pipeline, version 2.1.1 (reference: GRCh38_p12_primary_assembly_genome)
Seurat 2.3 using marker genes for cluster analyses
Genome_build: GRCh38
|
| |
|
| Submission date |
May 28, 2020 |
| Last update date |
Nov 02, 2020 |
| Contact name |
Christopher Esk |
| Organization name |
IMBA - Institute of Molecular Biotechnology GmbH
|
| Street address |
Dr. Bohr-Gasse 3
|
| City |
Vienna |
| ZIP/Postal code |
1030 |
| Country |
Austria |
| |
|
| Platform ID |
GPL21697 |
| Series (2) |
| GSE151381 |
A human tissue screen identifies a regulator of ER secretion as a brain size determinant [scRNA-Seq] |
| GSE151384 |
A human tissue screen identifies a regulator of ER secretion as a brain size determinant |
|
| Relations |
| BioSample |
SAMN15048355 |
| SRA |
SRX8417828 |
