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Sample GSM44586 Query DataSets for GSM44586
Status Public on May 02, 2005
Title Arabidopsis red light 3
Sample type RNA
 
Channel 1
Source name six-day Arabidopsis seedlings under continuous red light
Organism Arabidopsis thaliana
Extracted molecule total RNA
 
Channel 2
Source name six-day Arabidopsis seedlings in dark
Organism Arabidopsis thaliana
Extracted molecule total RNA
 
 
Description Arabidopsis seedling photomorphogenesis, whole seedlings, red light vs. dark.
Keywords = Arabidopsis
Keywords = photomorphogenesis
 
Submission date Mar 03, 2005
Last update date May 27, 2005
Contact name Yuling Jiao
Organization name California Institute of Technology
Department Biology
Lab Meyerowitz
Street address 1200 E California Blvd
City Pasadena
State/province CA
ZIP/Postal code 91125
Country USA
 
Platform ID GPL1077
Series (1)
GSE2360 Comparison analysis of rice and Arabidopsis photomorphogenesis

Data table header descriptions
ID_REF
VALUE Log (base 2) transform of the ratio of the normalized medians (Light vs. Dark).
CY5_SIG_MEDIAN Normalized median feature pixel intensity at wavelength 635 nm.
CY5_BKG_MEDIAN Corrected median feature background intensity at wavelength 635 nm.
CY3_SIG_MEDIAN Normalized median feature pixel intensity at wavelength 532 nm.
CY3_BKG_MEDIAN Corrected median feature background intensity at wavelength 532 nm.
FLAG The type of flag associated with a feature. An extension of GenePix 3.0 flags described at http://www.axon.com/gn_GPR_Format_History.html

Data table
ID_REF VALUE CY5_SIG_MEDIAN CY5_BKG_MEDIAN CY3_SIG_MEDIAN CY3_BKG_MEDIAN FLAG
A020440_01 0.25752146269232 1849.1893 227 1547.0000 190 0
A001043_01 -0.667708686638222 683.6666 119 1087.0000 190 0
A000100_01 0.0000 132 0.0000 191 -50
A000106_01 -0.152712639025462 250.2615 172 278.0000 191 0
A000124_01 -0.542069248658831 792.3741 131 1154.0000 191 0
A000130_01 0.0000 134 0.0000 190 -50
A000148_01 0.0000 135 0.0000 190 -50
A000154_01 0.0000 136 0.0000 190 -50
A000172_01 1.14703528592259 620.3125 421 280.0000 190 0
A000178_01 -1.26355705786129 433.4549 79 1041.0000 190 0
A000480_01 0.0000 137 0.0000 190 -50
A000486_01 -0.137674875177596 326.5271 172 359.0000 189 0
A000504_01 -0.162628785796784 251.0858 168 282.0000 189 0
A000510_01 0.0000 138 0.0000 189 -50
A000528_01 0.287226592703741 416.7047 230 341.0000 188 0
A000534_01 2.74837026116893 2056.9100 1264 306.0000 188 0
A000552_01 0.588147658702159 505.4973 280 338.0000 188 0
A000558_01 0.0000 138 0.0000 187 -50
A000860_01 0.0000 125 0.0000 190 -50
A000866_01 0.0000 126 0.0000 190 -50

Total number of rows: 26102

Table truncated, full table size 1295 Kbytes.




Supplementary data files not provided
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