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GEO accession:
Sample GSM44448
Query DataSets for GSM44448
Status
Public on Mar 05, 2005
Title
Tillering Shoot 3
Sample type
RNA
Channel 1
Source name
Shoots from tillering stage (Cy5)
Organism
Oryza sativa
Extracted molecule
total RNA
Channel 2
Source name
Cultured Cells (Cy3)
Organism
Oryza sativa
Extracted molecule
total RNA
Description
Tillering Shoot vs. Cultured Cell (control sample)
Keywords = rice
Keywords = shoot
Submission date
Mar 03, 2005
Last update date
May 27, 2005
Contact name
Yuling Jiao
Organization name
California Institute of Technology
Department
Biology
Lab
Meyerowitz
Street address
1200 E California Blvd
City
Pasadena
State/province
CA
ZIP/Postal code
91125
Country
USA
Platform ID
GPL1722
Series (1)
GSE2358
Expression Analysis of Rice Chromosome 4 Using Tiling Microarray
Data table header descriptions
ID_REF
VALUE
Log (base 2) transform of the ratio of the normalized medians.
CY5_MEDIAN
Normalized median feature pixel intensity at wavelength 635 nm with the median background subtracted.
CY3_MEDIAN
Normalized median feature pixel intensity at wavelength 532 nm with the median background subtracted.
FLAG
The type of flag associated with a feature. An extension of GenePix 3.0 flags described at http://www.axon.com/gn_GPR_Format_History.html
Data table
ID_REF
VALUE
CY5_MEDIAN
CY3_MEDIAN
FLAG
8083le04
0.2905707
3736.914082
3055.220899
0
8083nf08
0.239028713
1131.843338
959.0284839
0
8083ba09
0.129229255
1253.151306
1145.781034
0
8083fh01
0.731008431
2455.729421
1479.534337
0
8084he03
-0.110491821
236.6189456
255.4529176
-50
8084ff07
0.145231207
3220.870785
2912.422331
0
8084ga02
-0.195823319
2195.945262
2515.186556
0
8084gc04
0.125293972
477.1400335
437.4501935
0
8034mb04
-0.711577975
1768.580244
2896.216905
0
8034sb06
-0.319693715
328.7711605
410.3279612
-50
8035fe07
-0.311002892
341.4078848
423.540306
-100
8035gc05
-0.121391434
1784.099283
1940.713745
0
8035me09
-0.024602828
2429.639095
2471.427963
0
8035lc05
-0.908965502
322.7835895
606.0902921
-50
8036da12
-1.005471942
316.4214406
635.2477241
-50
8036ia01
-0.216465304
1262.576615
1466.966819
0
7018lf08
0.110748618
586.5602924
543.2178143
0
7018kd08
0.261717705
670.5590446
559.3094345
0
7018hf09
0.66690239
2101.493747
1323.641816
0
7018oc05
0.10781968
1238.987344
1149.767193
0
Total number of rows:
14044
Table truncated, full table size
649 Kbytes
.
Supplementary data files not provided
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