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GEO accession:
Sample GSM44437
Query DataSets for GSM44437
Status
Public on Mar 05, 2005
Title
Panicle 2
Sample type
RNA
Channel 1
Source name
Panicles from heading stage (Cy5)
Organism
Oryza sativa
Extracted molecule
total RNA
Channel 2
Source name
Cultured Cells (Cy3)
Organism
Oryza sativa
Extracted molecule
total RNA
Description
Panicle vs. Cultured Cell (control sample)
Keywords = rice
Keywords = panicle
Submission date
Mar 03, 2005
Last update date
May 27, 2005
Contact name
Yuling Jiao
Organization name
California Institute of Technology
Department
Biology
Lab
Meyerowitz
Street address
1200 E California Blvd
City
Pasadena
State/province
CA
ZIP/Postal code
91125
Country
USA
Platform ID
GPL1722
Series (1)
GSE2358
Expression Analysis of Rice Chromosome 4 Using Tiling Microarray
Data table header descriptions
ID_REF
VALUE
Log (base 2) transform of the ratio of the normalized medians.
CY5_MEDIAN
Normalized median feature pixel intensity at wavelength 635 nm with the median background subtracted.
CY3_MEDIAN
Normalized median feature pixel intensity at wavelength 532 nm with the median background subtracted.
FLAG
The type of flag associated with a feature. An extension of GenePix 3.0 flags described at http://www.axon.com/gn_GPR_Format_History.html
Data table
ID_REF
VALUE
CY5_MEDIAN
CY3_MEDIAN
FLAG
8083le04
-0.036136918
779.019877
798.7793616
0
8083nf08
0.297162962
470.2878244
382.7443337
0
8083ba09
-0.858724494
299.3015339
542.7636735
0
8083fh01
0.233253816
774.9088944
659.2258828
0
8084he03
0.346043566
109.5975008
86.22459392
-50
8084ff07
0.552867741
1559.578179
1063.107975
0
8084ga02
0.670014069
1225.623516
770.3050635
0
8084gc04
0.507466844
299.5137037
210.6948671
0
8034mb04
-0.120242178
727.9135649
791.1818487
0
8034sb06
0.292572069
123.7742834
101.0549175
-50
8035fe07
-0.223822261
183.3757248
214.1504828
0
8035gc05
0.790385362
921.7882359
532.9683986
0
8035me09
0.872505491
1578.954837
862.4211206
0
8035lc05
0.571798603
1871.529588
1259.123027
0
8036da12
-0.283403808
222.4718897
270.7622976
0
8036ia01
0.711898103
481.9632866
294.2464788
0
7018lf08
0.296526121
258.7009375
210.6370411
0
7018kd08
0.141687162
366.551857
332.2640376
0
7018hf09
0.078071667
631.0977931
597.8534612
0
7018oc05
-0.255545482
470.2961619
561.4334571
0
Total number of rows:
14044
Table truncated, full table size
649 Kbytes
.
Supplementary data files not provided
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