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GEO accession:
Sample GSM44416
Query DataSets for GSM44416
Status
Public on Mar 05, 2005
Title
Flag Leaf 2
Sample type
RNA
Channel 1
Source name
Flag leafs from heading stage (Cy5)
Organism
Oryza sativa
Extracted molecule
total RNA
Channel 2
Source name
Cultured Cells (Cy3)
Organism
Oryza sativa
Extracted molecule
total RNA
Description
Flag Leaf vs. Cultured Cell (control sample)
Keywords = rice
Keywords = flag leaf
Submission date
Mar 03, 2005
Last update date
May 27, 2005
Contact name
Yuling Jiao
Organization name
California Institute of Technology
Department
Biology
Lab
Meyerowitz
Street address
1200 E California Blvd
City
Pasadena
State/province
CA
ZIP/Postal code
91125
Country
USA
Platform ID
GPL1722
Series (1)
GSE2358
Expression Analysis of Rice Chromosome 4 Using Tiling Microarray
Data table header descriptions
ID_REF
VALUE
Log (base 2) transform of the ratio of the normalized medians.
CY5_MEDIAN
Normalized median feature pixel intensity at wavelength 635 nm with the median background subtracted.
CY3_MEDIAN
Normalized median feature pixel intensity at wavelength 532 nm with the median background subtracted.
FLAG
The type of flag associated with a feature. An extension of GenePix 3.0 flags described at http://www.axon.com/gn_GPR_Format_History.html
Data table
ID_REF
VALUE
CY5_MEDIAN
CY3_MEDIAN
FLAG
8083le04
-0.541335365
1674.383884
2436.762584
0
8083nf08
-0.27560546
710.4408064
859.9900154
0
8083ba09
-1.702587061
354.3610109
1153.38874
0
8083fh01
-0.008070924
1478.549928
1486.844616
0
8084he03
0.556267484
134.9777711
91.79289225
-50
8084ff07
-0.03482811
3068.361866
3143.336549
0
8084ga02
-0.213257266
1281.289362
1485.402171
0
8084gc04
0.398646818
651.7665224
494.4101744
0
8034mb04
-1.119149763
1550.059916
3367.023395
0
8034sb06
0.908168065
1259.796244
671.2966512
0
8035fe07
0.455390852
243.0756629
177.2781343
0
8035gc05
-0.11274425
1654.622385
1789.115164
0
8035me09
0.249864313
2882.508138
2424.118741
0
8035lc05
1.013937218
5580.227839
2763.28968
0
8036da12
-0.641471034
180.612642
281.7410755
0
8036ia01
-0.074332582
778.283972
819.4348373
0
7018lf08
0.637334405
332.6366166
213.8519828
0
7018kd08
0.227008186
723.6891139
618.3235196
0
7018hf09
0.045790236
1453.354178
1407.94999
0
7018oc05
0.150147493
1242.017692
1119.254588
0
Total number of rows:
14044
Table truncated, full table size
649 Kbytes
.
Supplementary data files not provided
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