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Status
Public on Jun 02, 2005
Title
Clof 24hr treated1
Sample type
RNA
Source name
Liver
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
Male SD rats were given a single dose of 1000mg/kg clofibrate using 0.9% saline as vehicle. Animal was sacrificed 24hrs post-dosing. Total RNA was extracted using the RNA STAT-60 kit from Tel-Test inc. Approximately 10ug of RNA was labeled according to the standard Affymetrix protocol. Signal values were calculated using the MAS 5.0 algorithm, with global scaling to 1500.
Submission date
Feb 22, 2005
Last update date
Jun 02, 2005
Contact name
Keith M Goldstein
E-mail(s)
[email protected] Organization name
Eli Lilly & Co.
Department
Investigative Toxicology
Lab
Keith Goldstein
Street address
Lilly Corporate Center
City
Indianapolis
State/province
IN
ZIP/Postal code
46285
Country
USA
Platform ID
GPL85 Series (1)
GSE2303 Rat liver response to Clofibrate, DEHP or VPA
Data table header descriptions ID_REF Affymetrix probeset ID
VALUE Signal from MAS5 with global scaling to 1500
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE rc_AA799636_at
46.196682
A
0.339558
rc_AA859777_f_at
25.71488
A
0.749276
U15280_at
45.37925
A
0.810313
AF001953_at
44.27589
A
0.732537
U15425_at
128.076004
A
0.250724
rc_AA893933_at
200.898682
A
0.397994
rc_AI639320_at
114.619453
A
0.127645
X66870_at
1862.369751
P
0.005643
rc_AA891965_at
476.165802
P
0.013092
M75148_at
471.694305
A
0.175989
rc_AA944007_g_at
5853.020996
P
0.000266
M94548_at
9154.707031
P
0.000219
rc_AI638941_at
14.905262
A
0.975289
X90475cds_at
209.717514
A
0.234557
U25651_at
424.441162
P
0.007543
rc_AA875146_s_at
3099.928711
P
0.006532
S35751_f_at
2347.470703
P
0.000562
rc_AA800768_at
109.297279
P
0.014937
rc_AI230789_at
13.50376
A
0.732537
X75785_at
103.65564
A
0.107301
8799 300 Kbytes .Supplementary file Size Download File type/resource GSM42956.CEL.gz
1.8 Mb
(ftp) (http) CEL
GSM42956.CHP.gz
2.8 Mb
(ftp) (http) CHP
GSM42956.EXP.gz
502 b
(ftp) (http) EXP
Processed data provided as supplementary file
