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Sample GSM390032 Query DataSets for GSM390032
Status Public on Feb 28, 2010
Title X1723260253_B
Sample type RNA
 
Source name PAXgene stabilized blood
Organism Homo sapiens
Characteristics cell type: PBMC
Growth protocol Peripheral blood samples
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with NanoDrop ThermoScientific.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Non Bronchial Carcinoma
Data processing The data were normalised using quantile normalisation in R
 
Submission date Apr 07, 2009
Last update date Oct 23, 2009
Contact name Thomas Zander
Organization name University Hospital Cologne
Street address Kerpenerstr. 62
City Cologne
ZIP/Postal code 50924
Country Germany
 
Platform ID GPL6102
Series (1)
GSE12771 Lung cancer prediction

Data table header descriptions
ID_REF
VALUE quantile normalized

Data table
ID_REF VALUE
ILMN_1809034 65.37223628
ILMN_1660305 82.0652125
ILMN_1792173 69.57108526
ILMN_1762337 44.83422587
ILMN_1736007 43.90508995
ILMN_1787689 57.27724189
ILMN_1731507 40.29563209
ILMN_1814316 43.08505827
ILMN_1745607 40.45931296
ILMN_1757454 54.25538209
ILMN_1668111 68.64952235
ILMN_1735045 46.92531648
ILMN_1680754 56.90554949
ILMN_1659452 39.54335719
ILMN_1767388 54.14258265
ILMN_1673870 41.38219061
ILMN_1675204 48.79798541
ILMN_1755321 70.98980816
ILMN_1698554 82.11302587
ILMN_1814092 58.30528923

Total number of rows: 48701

Table truncated, full table size 1183 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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