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Sample GSM387602 Query DataSets for GSM387602
Status Public on Apr 01, 2009
Title RAW_0mM_HOCl_#1
Sample type RNA
 
Source name RNA from RAW 264.7 Cells
Organism Mus musculus
Characteristics Array Type; Affymetrix Mouse 430_2
amount: 5ug
bioanalyzer results: Good
cell type: RAW 264.7
Biomaterial provider Courtney G. Woods, The Hamner Institutes, 6 Davis Dr, RTP, NC, 27709, [email protected] 919 558 1267, 919 558 1300
Treatment protocol Treatment: 0 mM HOCl in medium
Medium: see growth protocol below
Treatment Duration: 6 hours
Cell Confluency upon Treatment : ~80-90%
Growth protocol RAW 264.7 macrophages (RAW cells) were cultured in DMEM supplemented with 10% FBS, 10 mM HEPES, 100 U penicillin/ml, and 100 µg streptomycin/ml.
Extracted molecule total RNA
Extraction protocol Triazol
Label biotin
Label protocol standard affymetrix protocol
 
Hybridization protocol standard affymetrix protocol
Scan protocol standard affymetrix protocol
Description no additional information
Data processing Robust Multi-array Average
 
Submission date Mar 30, 2009
Last update date Mar 31, 2009
Contact name Courtney G Woods
E-mail(s) [email protected]
Phone 919-558-1267
Fax 919-558-1300
Organization name The Hamner Institutes
Department Computational Biology
Street address PO Box 12137, 6 Davis Drive
City Research Triangle Park
State/province NC
ZIP/Postal code 27709
Country USA
 
Platform ID GPL1261
Series (1)
GSE15457 Gene Expression Profiling of Cellular Dose-Response to Hypochlorous Acid (HOCl)

Data table header descriptions
ID_REF Affymetrix probe name
VALUE RMA Log Transformed Expression Value

Data table
ID_REF VALUE
1434829_at 3.4784102
1425868_at 0.27305698
1416312_at 5.56101
1455167_at 1.4719872
1435536_at 2.8429418
1453399_at 2.1332889
1442254_at 2.127523
1415711_at 3.7188
1430357_at 1.0926566
1455543_at 1.2867103
1429433_at 4.4479947
1416678_at 5.037124
1433190_at 0.15633106
1441956_s_at 2.086554
1439290_at 0.030130863
1427116_at 3.610783
1425696_at 0.33113337
1415784_at 1.6513934
1444248_at 0.008386135
1427162_a_at 2.8863893

Total number of rows: 45101

Table truncated, full table size 970 Kbytes.




Supplementary file Size Download File type/resource
GSM387602.CEL.gz 3.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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