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Sample GSM377997 Query DataSets for GSM377997
Status Public on Mar 06, 2009
Title NCI-H1573
Sample type RNA
 
Source name Lung:NSCLC
Organism Homo sapiens
Characteristics cell line: NCI-H1573
tissue: Lung:NSCLC
k-ras dependence: dependent
Extracted molecule total RNA
Extraction protocol Qiagen RNA easy kit
Label biotin
Label protocol Biotinylation of RNA with Perkin Elmer PN Biotin-11-UTP, and Biotin-11-CTP)
 
Hybridization protocol Labelled RNA was processed using a protocol from Affymetrix's GeneChip Expression Analysis Technical Manual under Eukaryotic Sample and Array Processing
Scan protocol Scanning was performed with an Affymetrix GeneChip 3000 Scanner
Description Gene expression data
Data processing Data was processed with GCOS ver 1.4
 
Submission date Mar 05, 2009
Last update date Mar 05, 2009
Contact name Patricia Greninger
E-mail(s) [email protected]
Organization name Massachusetts General Hospital Cancer Center
Department Center for Molecular Therapeutics
Lab Settleman Lab
Street address 149 13th St
City Charlestown
State/province MA
ZIP/Postal code 02129
Country USA
 
Platform ID GPL1352
Series (1)
GSE15126 A gene expression signature associated with K-Ras addiction reveals regulators of EMT and tumor cell survival

Data table header descriptions
ID_REF
VALUE log2 GCRMA normalized values

Data table
ID_REF VALUE
1053_3p_at 9.38315
117_3p_at 2.4785
1494_3p_f_at 1.95657
1552275_3p_s_at 2.53968
1552281_3p_at 3.12275
1552296_3p_at 2.55661
1552302_3p_at 3.72034
1552311_3p_a_at 3.02245
1552321_3p_a_at 2.40657
1552340_3p_at 2.15513
1552343_3p_s_at 4.77265
1552354_3p_at 2.48719
1552476_3p_s_at 2.16306
1552480_3p_s_at 2.80771
1552504_3p_a_at 2.32349
1552518_3p_s_at 3.71806
1552528_3p_at 2.15931
1552535_3p_at 2.20679
1552566_3p_at 1.88685
1552575_3p_a_at 3.58063

Total number of rows: 52920

Table truncated, full table size 1417 Kbytes.




Supplementary file Size Download File type/resource
GSM377997.CEL.gz 4.5 Mb (ftp)(http) CEL
GSM377997.txt.gz 351.8 Kb (ftp)(http) TXT
Processed data included within Sample table

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