|
| Status |
Public on Jan 12, 2009 |
| Title |
Control animal, animal #1 |
| Sample type |
RNA |
| |
|
| Source name |
Rat forebrain, control condition
|
| Organism |
Rattus norvegicus |
| Characteristics |
n/a
|
| Treatment protocol |
Six animals were moved into a novel environment containing objects of different shapes and colors for three hours
|
| Growth protocol |
Six-week old, male Long Evans rats were housed individually for several days
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Trizol extraction followed by RNEasy Mini Cleanup
|
| Label |
biotin
|
| Label protocol |
Labeled cRNA prepared according to standard Affymetrix procedures
|
| |
|
| Hybridization protocol |
Standard Affymetrix hybridization procedures.
|
| Scan protocol |
Standard Affymetrix scanning procedures.
|
| Description |
Expression profiling to identify genes upregulated in response to exposure to a novel environment
|
| Data processing |
Raw CEL files were normalized using RMAexpress.
|
| |
|
| Submission date |
Nov 10, 2008 |
| Last update date |
Jan 10, 2009 |
| Contact name |
Steven Willem Flavell |
| E-mail(s) |
[email protected]
|
| Organization name |
Children's Hospital Boston
|
| Department |
Neurology
|
| Lab |
Michael E. Greenberg
|
| Street address |
CLS 12260, 300 Longwood Avenue
|
| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02115 |
| Country |
USA |
| |
|
| Platform ID |
GPL1355 |
| Series (1) |
| GSE13539 |
Novel Environment Expression Profiling |
|
