|
| Status |
Public on Dec 03, 2019 |
| Title |
M_12157 BALB\c NeuT+ 24 weeks |
| Sample type |
RNA |
| |
|
| Source name |
Bone marrow tissue
|
| Organism |
Mus musculus |
| Characteristics |
gender: Female
genotype: BALB\c NeuT+
age (weeks): 24
tumor grade: advance_carcinoma
tumor burden: 101006151
|
| Growth protocol |
MMTV-NeuT transgenic females, and age-matched non transgenic siblings, were sacrified at 6, 12 and 24 weeks of age
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted using Trizol reagent (Life Technologies)
|
| Label |
Biotin
|
| Label protocol |
According to Illumina whole genome DASL assay
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol using an Illumina BeadArray reader
|
| Data processing |
Raw data were log2 transformed and normalized with robust spline normalization using the lumi package from Bioconductor
|
| |
|
| Submission date |
Jul 11, 2018 |
| Last update date |
Dec 03, 2019 |
| Contact name |
Matteo Milani |
| Organization name |
IRCCS Istituto Nazionale dei Tumori
|
| Street address |
Via Amadeo, 42
|
| City |
Milan |
| State/province |
Milan |
| ZIP/Postal code |
20133 |
| Country |
Italy |
| |
|
| Platform ID |
GPL6887 |
| Series (2) |
| GSE116962 |
Gene expression profile of bone marrow from MMTV-NeuT mouse model of spontaneous mammary carcinogenesis. |
| GSE117071 |
Gene expression profile of bone marrow and circulating miRNA profile from MMTV-NeuT mouse model of spontaneous mammary carcinogenesis. |
|
