NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM326167 Query DataSets for GSM326167
Status Public on Jul 01, 2009
Title DM002
Sample type RNA
 
Source name Whole blood from non-infected patient with type 2 diabetes
Organism Homo sapiens
Characteristics Age: 55
Gender: F
Ethnicity: Not Hispanic or Latino
Race: Asian
Illness: Control/type 2 diabetes
Treatment: N/A
Pathogen: N/A
Extracted molecule total RNA
Extraction protocol Tempus Spin Isolation Kit
Label biotin
Label protocol Biotinylated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion
 
Hybridization protocol Hybridize 6-Sample Beadchip
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description The subject diagnosted type 2 diabetes
Data processing The data were analysed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Oct 02, 2008
Last update date May 29, 2009
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6106
Series (1)
GSE13015 Genomic Transcriptional Profiling Identifies a Blood Biomarker Signature for the Diagnosis of Septicemic Melioidosis

Data table header descriptions
ID_REF Illumina probe set identifier
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
6960451 58.82433 0.000727802
2850504 -4.995117 0.7496361
7560397 -1.320738 0.5473071
5360747 -8.913346 0.9133915
2600731 1120.446 0
3990110 -4.087245 0.7147016
2120309 -18.53197 0.9970888
6420474 34.0036 0.002911208
670095 -9.528677 0.926492
130367 -3.391581 0.6746725
3830242 -4.58006 0.7358078
6480041 -5.003217 0.7496361
7510608 16.39702 0.01528384
1570494 9.277172 0.08951965
1740092 13.03905 0.0356623
3440520 -7.119484 0.8544396
6520451 9.898766 0.0720524
780746 -4.71276 0.7401747
150546 -3.685735 0.6899563
2640192 0.5266647 0.4454148

Total number of rows: 48687

Table truncated, full table size 1244 Kbytes.




Supplementary file Size Download File type/resource
GSM326167_DM002.xls.gz 3.1 Mb (ftp)(http) XLS
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap