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Sample GSM326100 Query DataSets for GSM326100
Status Public on Jul 01, 2009
Title R009
Sample type RNA
 
Source name Whole blood from patient who had recovered from melioidosis
Organism Homo sapiens
Characteristics Age: 41
Gender: M
Ethnicity: Not Hispanic or Latino
Race: Asian
Illness: Control/Recovery
Treatment: N/A
Pathogen: N/A
Extracted molecule total RNA
Extraction protocol Tempus Spin Isolation Kit
Label biotin
Label protocol Biotinylated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion
 
Hybridization protocol Hybridize 6-Sample Beadchip
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description The subject had recovered from melioidosis
Data processing The data were analysed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Oct 02, 2008
Last update date May 29, 2009
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6106
Series (1)
GSE13015 Genomic Transcriptional Profiling Identifies a Blood Biomarker Signature for the Diagnosis of Septicemic Melioidosis

Data table header descriptions
ID_REF Illumina probe set identifier
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
6960451 21.29434 0
2850504 0.5803446 0.4219097
7560397 2.124851 0.2524056
5360747 2.187447 0.2457439
2600731 623.5865 0
3990110 3.432919 0.1428571
2120309 -5.0513 0.9563286
6420474 22.81103 0
670095 -2.71735 0.7853442
130367 0.2721732 0.4603997
3830242 -6.102195 0.9859363
6480041 -0.7371857 0.5669874
7510608 7.154388 0.01702443
1570494 12.31077 0
1740092 0.8783269 0.3967431
3440520 0.851778 0.4019245
6520451 8.890129 0.001480385
780746 4.314985 0.09252406
150546 -3.749865 0.8837898
2640192 -0.1296104 0.5092524

Total number of rows: 48687

Table truncated, full table size 1187 Kbytes.




Supplementary file Size Download File type/resource
GSM326100_R009.xls.gz 3.0 Mb (ftp)(http) XLS
Processed data included within Sample table

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