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Sample GSM326099 Query DataSets for GSM326099
Status Public on Jul 01, 2009
Title R008
Sample type RNA
 
Source name Whole blood from patient who had recovered from melioidosis
Organism Homo sapiens
Characteristics Age: 39
Gender: M
Ethnicity: Not Hispanic or Latino
Race: Asian
Illness: Control/Recovery
Treatment: N/A
Pathogen: N/A
Extracted molecule total RNA
Extraction protocol Tempus Spin Isolation Kit
Label biotin
Label protocol Biotinylated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion
 
Hybridization protocol Hybridize 6-Sample Beadchip
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Control/Recovery
Data processing The data were analysed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Oct 02, 2008
Last update date May 29, 2009
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6106
Series (1)
GSE13015 Genomic Transcriptional Profiling Identifies a Blood Biomarker Signature for the Diagnosis of Septicemic Melioidosis

Data table header descriptions
ID_REF Illumina probe set identifier
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
6960451 37.28305 0
2850504 1.064083 0.3352984
7560397 0.392118 0.4156227
5360747 -2.988958 0.8629329
2600731 742.1705 0
3990110 1.959697 0.2343405
2120309 -2.336671 0.7929256
6420474 12.47244 0
670095 -2.244056 0.7833456
130367 -2.913792 0.8540899
3830242 -2.527685 0.8091378
6480041 -3.378594 0.8997789
7510608 5.797636 0.02726603
1570494 6.096788 0.01989683
1740092 3.440278 0.1238025
3440520 2.349889 0.1974945
6520451 9.930109 0
780746 2.435207 0.1871776
150546 -2.289605 0.7877671
2640192 0.3146498 0.4259396

Total number of rows: 48687

Table truncated, full table size 1188 Kbytes.




Supplementary file Size Download File type/resource
GSM326099_R008.xls.gz 3.0 Mb (ftp)(http) XLS
Processed data included within Sample table

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