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Sample GSM317619 Query DataSets for GSM317619
Status Public on Sep 17, 2008
Title Apex_14DAS_1
Sample type RNA
 
Source name Arabidopsis thaliana vegetative apices, 14DAS
Organism Arabidopsis thaliana
Characteristics Ecotype: Ler
Growth protocol Soil grown in short days
Extracted molecule total RNA
Extraction protocol RNA extracted with Qiagen RNAEasy kit according to manufacturer protocol
Label Standard Affymetrix protocol
Label protocol Standard Affymetrix protocol
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Description N/A
Data processing Values obtained using MAS5. Median was normalized to 50.
 
Submission date Sep 03, 2008
Last update date Sep 17, 2008
Contact name Idan D. Efroni
E-mail(s) [email protected]
Organization name Weizmann Institute
Street address Weizmann
City Rehovot
ZIP/Postal code 76100
Country Israel
 
Platform ID GPL198
Series (1)
GSE12676 Arabidopsis thaliana Ler developmental series

Data table header descriptions
ID_REF
VALUE Expression value
ABS_CALL Present call
DETECTION P-VALUE Detection P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 29.27631579 P 0.033677
AFFX-BioB-M_at 12.82894737 M 0.050229
AFFX-BioB-3_at 16.91729323 P 0.020022
AFFX-BioC-5_at 51.55075188 P 0.00039
AFFX-BioC-3_at 26.69172932 P 0.002867
AFFX-BioDn-5_at 25.65789474 P 0.000169
AFFX-BioDn-3_at 229.6052632 P 0.00007
AFFX-CreX-5_at 446.6165414 P 0.000052
AFFX-CreX-3_at 924.906015 P 0.000044
AFFX-DapX-5_at 9.492481203 P 0.00141
AFFX-DapX-M_at 15.46052632 P 0.028457
AFFX-DapX-3_at 19.31390977 P 0.039661
AFFX-LysX-5_at 0.657894737 A 0.645547
AFFX-LysX-M_at 10.52631579 A 0.51489
AFFX-LysX-3_at 5.45112782 A 0.216524
AFFX-PheX-5_at 0.986842105 A 0.937071
AFFX-PheX-M_at 1.268796992 A 0.772364
AFFX-PheX-3_at 3.430451128 A 0.724854
AFFX-ThrX-5_at 1.17481203 A 0.749204
AFFX-ThrX-M_at 10.2443609 A 0.116113

Total number of rows: 22810

Table truncated, full table size 730 Kbytes.




Supplementary file Size Download File type/resource
GSM317619.CEL.gz 2.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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