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Sample GSM315598 Query DataSets for GSM315598
Status Public on Aug 30, 2008
Title WT1_muscle_4 month
Sample type RNA
 
Source name WT_muscle_4 month
Organism Mus musculus
Characteristics B10_4 months old_pectoralis_male
Extracted molecule total RNA
Extraction protocol RNeasy
Label biotin
Label protocol 1ug total RNA was labeled using the Magascript Ambion kit (cat#AM1334)
 
Hybridization protocol 15ug of labeled cRNA were hybridized on the MOE 430A2.0 arrays
Scan protocol according to manufacturer
Description Blastocyst Injection of Wild Type Embryonic Stem Cells Induces Global Corrections in Mdx Mice.
Data processing Overall intensity was targetted to 500. Signal intensities were generated using GCOS1.4
 
Submission date Aug 26, 2008
Last update date Mar 18, 2009
Contact name Agnes Viale
E-mail(s) [email protected]
Phone 212 639 3031
Fax 212 717 3053
Organization name Memorial Sloan Kettering Cancer Center
Department Molecular Biology
Lab Genomics Core Laboratory
Street address 1275 York Avenue
City New York
State/province NY
ZIP/Postal code 10021
Country USA
 
Platform ID GPL8321
Series (1)
GSE12580 Blastocyst Injection of Wild Type Embryonic Stem Cells Induces Global Corrections in Mdx Mice.

Data table header descriptions
ID_REF
VALUE signal intensity
ABS_CALL flag
DETECTION P-VALUE confidence on flag

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 328.529 P 0.0032123
AFFX-BioB-M_at 325.748 P 0.00159257
AFFX-BioB-3_at 203.482 P 0.00179591
AFFX-BioC-5_at 935.478 P 0.000753643
AFFX-BioC-3_at 715.675 P 5.16732e-05
AFFX-BioDn-5_at 2013.99 P 5.16732e-05
AFFX-BioDn-3_at 4793.38 P 0.000224668
AFFX-CreX-5_at 9333.13 P 5.16732e-05
AFFX-CreX-3_at 10763.9 P 4.42873e-05
AFFX-DapX-5_at 75.5297 P 0.00401721
AFFX-DapX-M_at 880.433 P 0.0012475
AFFX-DapX-3_at 2187.84 P 4.42873e-05
AFFX-LysX-5_at 42.3044 A 0.147939
AFFX-LysX-M_at 198.871 P 0.0103167
AFFX-LysX-3_at 735.301 P 9.4506e-05
AFFX-PheX-5_at 41.6312 A 0.262827
AFFX-PheX-M_at 109.173 P 0.00159257
AFFX-PheX-3_at 367.579 P 0.00010954
AFFX-ThrX-5_at 35.9641 A 0.39692
AFFX-ThrX-M_at 146.526 P 0.0284573

Total number of rows: 22690

Table truncated, full table size 694 Kbytes.




Supplementary file Size Download File type/resource
GSM315598.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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