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Sample GSM3152218 Query DataSets for GSM3152218
Status Public on Jul 16, 2019
Title AML patient#080
Sample type RNA
 
Source name AML patient
Organism Homo sapiens
Characteristics subject status: acute myeloid leukemia (AML)
subject id: AML patient#080
tissue: bone marrow
cell type: mononucleated cells
Treatment protocol not applicable
Growth protocol Mononucleated cells from the bone marrow samples of the AML patients and the healthy controls
Extracted molecule total RNA
Extraction protocol TRIzol
Label biotin
Label protocol According to the protocols of Affymetrix Gene Expression Service Lab, Academia Sinica, Taiwan
 
Hybridization protocol According to the protocols of Affymetrix Gene Expression Service Lab, Academia Sinica, Taiwan
Scan protocol According to the protocols of Affymetrix Gene Expression Service Lab, Academia Sinica, Taiwan
Description AML1970
Data processing Data were processed using Expression Console software with RMA normalization.
probe group file: HTA-2_0.r3.pgf
meta-probeset file: HTA-2_0.r3.Psrs.mps
 
Submission date May 24, 2018
Last update date Jul 16, 2019
Contact name Huai-Hsuan Huang
E-mail(s) [email protected]
Organization name National Taiwan University Hospital
Department Internal Medicine
Street address No.7, Chong-Shan South Road, Zhongzheng Dist.
City Taipei City
State/province Taiwan
ZIP/Postal code 100
Country Taiwan
 
Platform ID GPL17586
Series (1)
GSE114868 Long non-coding RNA HOXB-AS3 promotes myeloid cell proliferation and its higher expression is an adverse prognostic marker in myeloid malignancies [AML_normal]

Data table header descriptions
ID_REF
VALUE RMA normalized gene level expression values from Expression Console software

Data table
ID_REF VALUE
TC01000001.hg.1 7.54057
TC01000002.hg.1 3.828974
TC01000003.hg.1 3.362501
TC01000004.hg.1 3.581266
TC01000005.hg.1 10.87943
TC01000006.hg.1 18.05832
TC01000007.hg.1 16.77971
TC01000008.hg.1 6.994641
TC01000009.hg.1 3.707442
TC01000010.hg.1 3.081602
TC01000011.hg.1 6.186806
TC01000012.hg.1 4.585328
TC01000013.hg.1 15.29717
TC01000014.hg.1 4.322862
TC01000015.hg.1 5.438186
TC01000016.hg.1 6.300644
TC01000017.hg.1 4.102412
TC01000018.hg.1 8.341485
TC01000019.hg.1 5.792316
TC01000020.hg.1 4.517208

Total number of rows: 70523

Table truncated, full table size 1724 Kbytes.




Supplementary file Size Download File type/resource
GSM3152218_AML1970.CEL.gz 23.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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