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Sample GSM30966 Query DataSets for GSM30966
Status Public on Sep 30, 2004
Title DA#160 U34A
Sample type RNA
 
Source name Heart, Left Ventricle
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description RNA was extracted from the left ventricle of the heart, taken from a single 15 week old inbred rat that was maintained under specific pathogen free conditions. Target cRNA was prepared using the Enzo Bioarray High Yield RNA Transcript Labeling Kit (Enzo Diagnostics, Farmingdale, NY), purified on a column (Rneasy mini kit, Qiagen), and hybridized to commercially available Affymetrix rat GeneChips arrays according to protocols recommended by the manufacturers. Data was analyzed using the GeneChip Expression Analysis Software (Affymetrix).
Keywords = quantitative real-time RT-PCR
Keywords = insulin receptor substrate 2 (Irs2)
Keywords = phosphatidylinositol 3-kinase
Keywords = regulatory subunit 1
Keywords = (Pik3r1)
Keywords = endurance running
Keywords = treadmill running
 
Submission date Sep 23, 2004
Last update date May 27, 2005
Contact name Justin A. Ways
E-mail(s) [email protected]
Phone 419-383-4150
Organization name Medical College of Ohio
Department Physiology and Cardiovascular Genomics
Street address 3035 Arlington Ave.
City Toledo
State/province OH
ZIP/Postal code 43614
Country USA
 
Platform ID GPL85
Series (1)
GSE1795 Expression Profiling of DA, COP, and F1(COPxDA) rat left ventricles

Data table header descriptions
ID_REF
VALUE normalized signal representing quantity of transcript
ABS_CALL absolute detection call where P=present, A=absent, and M=marginal
DETECTION P-VALUE measure of the significance of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-MurIL2_at 2.9 A 0.921998
AFFX-MurIL10_at 3.3 A 0.814869
AFFX-MurIL4_at 0.6 A 0.984817
AFFX-MurFAS_at 3.1 A 0.824672
AFFX-BioB-5_at 10.6 A 0.824672
AFFX-BioB-M_at 7.4 A 0.559354
AFFX-BioB-3_at 38.9 A 0.185131
AFFX-BioC-5_at 272.2 P 0.001248
AFFX-BioC-3_at 169 A 0.185131
AFFX-BioDn-5_at 341 P 0.006871
AFFX-BioDn-3_at 2071.4 P 0.000095
AFFX-CreX-5_at 3393.4 P 0.000044
AFFX-CreX-3_at 4067.6 P 0.000044
AFFX-BioB-5_st 52.6 A 0.156732
AFFX-BioB-M_st 58.7 A 0.425962
AFFX-BioB-3_st 9.4 A 0.979978
AFFX-BioC-5_st 6.6 A 0.966323
AFFX-BioC-3_st 1.7 A 0.971543
AFFX-BioDn-5_st 41.9 A 0.250796
AFFX-BioDn-3_st 11.1 A 0.760937

Total number of rows: 8799

Table truncated, full table size 248 Kbytes.




Supplementary data files not provided

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