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Sample GSM30965 Query DataSets for GSM30965
Status Public on Sep 30, 2004
Title DA#57 U34A
Sample type RNA
 
Source name Heart, Left Ventricle
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description RNA was extracted from the left ventricle of the heart, taken from a single 15 week old inbred rat that was maintained under specific pathogen free conditions. Target cRNA was prepared using the Enzo Bioarray High Yield RNA Transcript Labeling Kit (Enzo Diagnostics, Farmingdale, NY), purified on a column (Rneasy mini kit, Qiagen), and hybridized to commercially available Affymetrix rat GeneChips arrays according to protocols recommended by the manufacturers. Data was analyzed using the GeneChip Expression Analysis Software (Affymetrix).
Keywords = quantitative real-time RT-PCR
Keywords = insulin receptor substrate 2 (Irs2)
Keywords = phosphatidylinositol 3-kinase
Keywords = regulatory subunit 1
Keywords = (Pik3r1)
Keywords = endurance running
Keywords = treadmill running
 
Submission date Sep 23, 2004
Last update date May 27, 2005
Contact name Justin A. Ways
E-mail(s) [email protected]
Phone 419-383-4150
Organization name Medical College of Ohio
Department Physiology and Cardiovascular Genomics
Street address 3035 Arlington Ave.
City Toledo
State/province OH
ZIP/Postal code 43614
Country USA
 
Platform ID GPL85
Series (1)
GSE1795 Expression Profiling of DA, COP, and F1(COPxDA) rat left ventricles

Data table header descriptions
ID_REF
VALUE normalized signal representing quantity of transcript
ABS_CALL absolute detection call where P=present, A=absent, and M=marginal
DETECTION P-VALUE measure of the significance of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-MurIL2_at 3.5 A 0.876428
AFFX-MurIL10_at 4.3 A 0.737173
AFFX-MurIL4_at 0.8 A 0.969024
AFFX-MurFAS_at 9.3 A 0.559354
AFFX-BioB-5_at 22.4 A 0.300606
AFFX-BioB-M_at 113.5 P 0.001593
AFFX-BioB-3_at 77.6 P 0.033677
AFFX-BioC-5_at 373.5 P 0.000169
AFFX-BioC-3_at 232.8 P 0.005565
AFFX-BioDn-5_at 292.9 P 0.002275
AFFX-BioDn-3_at 1892.1 P 0.000127
AFFX-CreX-5_at 3454.6 P 0.000044
AFFX-CreX-3_at 4363.5 P 0.000044
AFFX-BioB-5_st 31.3 A 0.340661
AFFX-BioB-M_st 30.2 A 0.559354
AFFX-BioB-3_st 6.4 A 0.963431
AFFX-BioC-5_st 6.9 A 0.941556
AFFX-BioC-3_st 2.2 A 0.960339
AFFX-BioDn-5_st 54.5 A 0.216524
AFFX-BioDn-3_st 33.3 A 0.382599

Total number of rows: 8799

Table truncated, full table size 248 Kbytes.




Supplementary data files not provided

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