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Sample GSM304479 Query DataSets for GSM304479
Status Public on Aug 30, 2008
Title K562 cells control replicate 3
Sample type RNA
 
Source name K562 cells
Organism Homo sapiens
Characteristics K562 (Iscoves + 10% FCS) and TF-1 (RPMI + 10%FCS + rhGM-CSF. Cells were cultured at 37oC, 5% CO2 and split every 3 to 4 days
Extracted molecule total RNA
Extraction protocol RNA samples were labeled and hybridized by standard protocol to Affymetrix GeneChip Human Genome U133+ Array Set HG-U133A array
Label biotin
Label protocol RNA samples were labeled and hybridized by standard protocol to Affymetrix GeneChip Human Genome U133+ Array Set HG-U133A array
 
Hybridization protocol RNA samples were labeled and hybridized by standard protocol to Affymetrix GeneChip Human Genome U133+ Array Set HG-U133A array
Scan protocol RNA samples were labeled and hybridized by standard protocol to Affymetrix GeneChip Human Genome U133+ Array Set HG-U133A array
Description none
Data processing MAS5.0
 
Submission date Jul 09, 2008
Last update date Aug 28, 2018
Contact name matteo pellegrini
E-mail(s) [email protected]
Phone 310 825-0012
Organization name UCLA
Street address 610 charles young drive east
City los angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL570
Series (1)
GSE12056 Expression Profile of CREB knockdown in Myeloid Leukemia Cells
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE Intensity
ABS_CALL Present or absent
DETECTION P-VALUE P value for ABS_CALL

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2139.9 P 0.000662
AFFX-BioB-M_at 2408.7 P 0.000044
AFFX-BioB-3_at 1668.1 P 0.000972
AFFX-BioC-5_at 5353.3 P 0.000052
AFFX-BioC-3_at 7619.8 P 0.000044
AFFX-BioDn-5_at 13525.2 P 0.000044
AFFX-BioDn-3_at 29990.9 P 0.000081
AFFX-CreX-5_at 78686.3 P 0.000052
AFFX-CreX-3_at 104186.6 P 0.000044
AFFX-DapX-5_at 91.6 A 0.500000
AFFX-DapX-M_at 206.8 A 0.287743
AFFX-DapX-3_at 30.4 A 0.921998
AFFX-LysX-5_at 68.3 A 0.631562
AFFX-LysX-M_at 247.5 A 0.368438
AFFX-LysX-3_at 153.8 A 0.102165
AFFX-PheX-5_at 51.0 A 0.500000
AFFX-PheX-M_at 17.2 A 0.981728
AFFX-PheX-3_at 378.1 A 0.195266
AFFX-ThrX-5_at 45.7 A 0.631562
AFFX-ThrX-M_at 36.8 A 0.617401

Total number of rows: 54674

Table truncated, full table size 1494 Kbytes.




Supplementary file Size Download File type/resource
GSM304479_77464-77444.CEL.gz 5.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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