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Sample GSM30220 Query DataSets for GSM30220
Status Public on Sep 04, 2004
Title F1477-I3 versus pool
Sample type RNA
 
Channel 1
Source name F1477-I3
Organism Homo sapiens
Characteristics ped.id: 1477
person.id: 3
Description: CEPH 1477 DAUGHTER GM12899
Biomaterial provider Coriell Cell Repositories identifier GM12899
(http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12899)
Extracted molecule total RNA
 
Channel 2
Source name pool
Organism Homo sapiens
Characteristics A common pool created from equal portions of RNA from all samples.
Biomaterial provider Coriell (http://www.coriell.org/)
Extracted molecule total RNA
 
 
Description Lymphoblastoid cell lines were obtained from Coriell Repositories.
Sample identifiers consist of the family identifier and individual identifier for the sample source.
All individuals were compared to a common pool created from equal portions of RNA from all samples.
See Monks, et al., American Journal of Human Genetics (2004) for details.
 
Submission date Sep 03, 2004
Last update date Nov 21, 2008
Contact name Stephen W Edwards
E-mail(s) [email protected]
Phone 425 636 6409
URL http://www.rii.com
Organization name Rosetta Inpharmatics (Merck & Co.)
Department Research Genetics
Street address
City Seattle
State/province WA
ZIP/Postal code 98034
Country USA
 
Platform ID GPL564
Series (1)
GSE1726 Rosetta_Merck_CEPH_Study

Data table header descriptions
ID_REF Rosetta generated unique probe identifier
VALUE MLRATIO: Averaged log10 ratio [log10(CHANNEL1/CHANNEL2), error weighted]
LOGINTENSITY Average log intensity of channels
PVALUE P-value of LogRatio
MLRATIOERROR Error estimate for MLRATIO (VALUE)

Data table
ID_REF VALUE LOGINTENSITY PVALUE MLRATIOERROR
10012684492 4.9639999999999997E-2 -1.1898599999999999 0.63099192820000005 0.10334
10012679250 -0.15145 -1.7121900000000001 0.35290917100000002 0.16303000000000001
10017961237 -0.20508999999999999 -0.48444999999999999 1.5783526499999999E-2 8.4959999999999994E-2
10012681431 -5.5669999999999997E-2 -1.32748 0.64149137040000004 0.11957
10012682280 5.9279999999999999E-2 -1.5542199999999999 0.64958440819999996 0.13047
10012679330 -3.4759999999999999E-2 -1.1060000000000001 0.67035446259999998 8.1670000000000006E-2
10012666020 -0.03381 -1.34765 0.68763524249999997 8.4099999999999994E-2
10012666532 -3.6360000000000003E-2 -1.58863 0.80120783039999999 0.14443
10012668909 -9.1300000000000006E-2 -0.65364 0.15820931730000001 6.4699999999999994E-2
10012675176 0.17383000000000001 -0.65130999999999994 0.0167847702 7.2690000000000005E-2
10012666129 -6.4949999999999994E-2 -0.57245999999999997 0.62209207079999995 0.13178000000000001
10012667359 0.32122000000000001 -1.80223 0.16802346939999999 0.23300999999999999
10012685183 -0.14566999999999999 -1.1122399999999999 3.3763132799999998E-2 0.06862
10012668951 -0.21262 -1.3560099999999999 8.0857545399999994E-2 0.12179
10012669544 1.5610000000000001E-2 -1.0449900000000001 0.80448770130000002 6.3060000000000005E-2
10012678741 3.4979999999999997E-2 -1.4827600000000001 0.84381707989999999 0.17755000000000001
10012674019 5.0070000000000003E-2 -1.796 0.83983389590000002 0.24773000000000001
10012683076 9.9339999999999998E-2 -1.4719899999999999 0.36695729420000001 0.11011
10012689072 -2.3600000000000001E-3 -0.15093000000000001 0.96674979319999998 5.6550000000000003E-2
10012686248 0.10456 -1.8819999999999999 0.67806181409999999 0.25187999999999999

Total number of rows: 23880

Table truncated, full table size 1960 Kbytes.




Supplementary data files not provided
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