NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM30199 Query DataSets for GSM30199
Status Public on Sep 04, 2004
Title F1421-I10 versus pool
Sample type RNA
 
Channel 1
Source name F1421-I10
Organism Homo sapiens
Characteristics ped.id: 1421
person.id: 10
Description: CEPH 1421 PATERNALGRANDMOTHER GM12283
Biomaterial provider Coriell Cell Repositories identifier GM12283
(http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12283)
Extracted molecule total RNA
 
Channel 2
Source name pool
Organism Homo sapiens
Characteristics A common pool created from equal portions of RNA from all samples.
Biomaterial provider Coriell (http://www.coriell.org/)
Extracted molecule total RNA
 
 
Description Lymphoblastoid cell lines were obtained from Coriell Repositories.
Sample identifiers consist of the family identifier and individual identifier for the sample source.
All individuals were compared to a common pool created from equal portions of RNA from all samples.
See Monks, et al., American Journal of Human Genetics (2004) for details.
 
Submission date Sep 03, 2004
Last update date Nov 21, 2008
Contact name Stephen W Edwards
E-mail(s) [email protected]
Phone 425 636 6409
URL http://www.rii.com
Organization name Rosetta Inpharmatics (Merck & Co.)
Department Research Genetics
Street address
City Seattle
State/province WA
ZIP/Postal code 98034
Country USA
 
Platform ID GPL564
Series (1)
GSE1726 Rosetta_Merck_CEPH_Study

Data table header descriptions
ID_REF Rosetta generated unique probe identifier
VALUE MLRATIO: Averaged log10 ratio [log10(CHANNEL1/CHANNEL2), error weighted]
LOGINTENSITY Average log intensity of channels
PVALUE P-value of LogRatio
MLRATIOERROR Error estimate for MLRATIO (VALUE)

Data table
ID_REF VALUE LOGINTENSITY PVALUE MLRATIOERROR
10012684492 9.2499999999999999E-2 -1.37104 0.52317764850000004 0.14488000000000001
10012679250 6.7900000000000002E-2 -1.72915 0.78345136859999998 0.24706
10017961237 -0.06479 -0.86273 1.0
10012681431 -1.4800000000000001E-2 -1.20252 0.89940430849999997 0.11706
10012682280 0.18842 -1.8295999999999999 0.55134808010000003 0.31628000000000001
10012679330 -1.5879999999999998E-2 -1.25315 0.89787381200000005 0.1237
10012666020 5.1000000000000004E-4 -1.56392 0.99760135709999997 0.17055000000000001
10012666532 9.5049999999999996E-2 -1.4735 0.54426729299999999 0.15675
10012668909 -0.12005 -0.73438000000000003 0.1119886626 7.5539999999999996E-2
10012675176 0.14749999999999999 -0.82752999999999999 8.9732657999999996E-3 0.05645
10012666129 -0.12548000000000001 -0.94896000000000003 0.14071062819999999 8.5180000000000006E-2
10012667359 6.9199999999999998E-2 -1.9167799999999999 0.86071637779999999 0.39439999999999997
10012685183 -0.16478000000000001 -1.1188199999999999 0.2132405144 0.13238
10012668951 -0.26621 -1.74902 0.27966110389999999 0.24623999999999999
10012669544 4.8439999999999997E-2 -1.0338400000000001 0.66132856250000005 0.11057
10012678741 0.1118 -1.5436099999999999 0.5443951253 0.18443999999999999
10012674019 6.7369999999999999E-2 -1.79173 0.84398792030000003 0.34233999999999998
10012683076 5.3030000000000001E-2 -1.72977 0.86688302719999999 0.31639
10012689072 0.12323000000000001 -9.5890000000000003E-2 3.5602252100000002E-2 5.8639999999999998E-2
10012686248 0.12573000000000001 -2.1335999999999999 0.83896010509999996 0.61865999999999999

Total number of rows: 23880

Table truncated, full table size 1960 Kbytes.




Supplementary data files not provided
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap