|
| Status |
Public on Dec 05, 2018 |
| Title |
CBD sample 6 [cbdmeth] |
| Sample type |
genomic |
| |
|
| Source name |
BALF
|
| Organism |
Homo sapiens |
| Characteristics |
dx: CBD
Sex: Male
race: W
ethnicity: non-hispanic
smoking status: Never
total lung capacity, percent predicted: 105
forced vital capacity, percent predicted: 87
forced expiratory volume in one second, percent predicted: 89
age: 64
treatment: Treated
1stdrug: Steroids
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
DNA and RNA extracted using the AllPrep kit from Qiagen from freshly collected cells
|
| Label |
Cy3, Cy5
|
| Label protocol |
Illumina standard protocol
|
| |
|
| Hybridization protocol |
Illumina standard protocol
|
| Scan protocol |
iScan
|
| Description |
Bisulfite-converted DNA from primary patient cells
|
| Data processing |
SWAN normalization and logit transformation for methylation arrays
|
| |
|
| Submission date |
Feb 18, 2018 |
| Last update date |
Dec 05, 2018 |
| Contact name |
Ivana Yang |
| E-mail(s) |
[email protected]
|
| Organization name |
University of Colorado - Anschutz Medical Campus
|
| Street address |
12700 E 19th Ave
|
| City |
Aurora |
| State/province |
CO |
| ZIP/Postal code |
80045 |
| Country |
USA |
| |
|
| Platform ID |
GPL13534 |
| Series (2) |
| GSE110778 |
DNA Methylation Changes in Lung Immune Cells are Associated with Granulomatous Lung Disease [CBD Methylation] |
| GSE110780 |
DNA Methylation Changes in Lung Immune Cells are Associated with Granulomatous Lung Disease |
|
