NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM297220 Query DataSets for GSM297220
Status Public on Jun 05, 2009
Title DU145_pre205_rep3
Sample type RNA
 
Source name miR-205
Organism Homo sapiens
Characteristics DU145 cells
transfected with Pre-miR™ miRNA Precursor Molecule miR-205 (Ambion)
Treatment protocol Transfection with 20nM Pre-miR™ miRNA Precursor Molecules (Ambion), using Lipofectamine2000 (Invitrogen).
Extracted molecule total RNA
Extraction protocol Three days after transfection, cells were harvested and total RNA extracted using Trizol Reagent (Invitrogen) according to the manufacturer's instructions
Label Cy3
Label protocol standard Illumina protocol (Cy3)
 
Hybridization protocol standard Illumina protocol
Scan protocol standard Illumina protocol
Description DU145 cells transfected with Pre-miR™ miRNA Precursor Molecule miR-205 (Ambion)
Data processing BeadStudio Gene Expression Module v_3; cubic spline normalization; filtering: detection p-value<0.05
 
Submission date Jun 06, 2008
Last update date Jun 06, 2008
Contact name Paolo Gandellini
E-mail(s) [email protected]
Organization name Fondazione IRCCS Istituto Nazionale Tumori
Department Department of Applied Research and Technological Development
Street address Via Amadeo 42
City Milan
ZIP/Postal code 20133
Country Italy
 
Platform ID GPL6104
Series (1)
GSE11701 Genes modulated by miR-205 in DU145 prostate cancer cells

Data table header descriptions
ID_REF
VALUE normalized signal intensity

Data table
ID_REF VALUE
ILMN_1725528 113.8
ILMN_1746533 39.5
ILMN_1800540 918.8
ILMN_1785340 77.8
ILMN_1779536 36
ILMN_1654552 419.5
ILMN_1654861 235.4
ILMN_1697268 740
ILMN_1720430 99.7
ILMN_1665877 877.3
ILMN_1789751 770.4
ILMN_1695763 156.7
ILMN_1751530 197.4
ILMN_1763386 487.8
ILMN_1730670 146
ILMN_1660840 1065.5
ILMN_1805175 428.1
ILMN_1688299 74.2
ILMN_1762255 119.7
ILMN_1751124 63

Total number of rows: 11677

Table truncated, full table size 211 Kbytes.




Supplementary file Size Download File type/resource
GSM297220.txt.gz 304.3 Kb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap