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Status
Public on Apr 15, 2010
Title
rhesus hippocampal CA1, 23.25 years old, replicate 3
Sample type
RNA
Source name
Rhesus hippocampus CA1
Organism
Macaca mulatta Characteristics
Female
Extracted molecule
total RNA
Extraction protocol
Standard Affymetrix
Label
Standard Affymetrix
Label protocol
Standard Affymetrix
Hybridization protocol
Standard Affymetrix
Scan protocol
Standard Affymetrix
Description
rhesus hippocampal CA1, 23.25 years old, replicate 3
Data processing
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
Submission date
Jun 05, 2008
Last update date
Mar 15, 2010
Contact name
Eric M Blalock
E-mail(s)
[email protected] Phone
859-323-8033
Organization name
University of Kentucky
Department
Molecular and Biomedical Pharmacology
Lab
Blalock
Street address
800 Rose St.
City
Lexington
State/province
KY
ZIP/Postal code
40475
Country
USA
Platform ID
GPL3535 Series (1)
GSE11697 Young and aged rhesus hippocampal CA1 and DG
Data table header descriptions ID_REF Probe Set
VALUE MAS5-calculated Signal intensity
DETECTION P-VALUE the probability that a probe set is absent, ranging from 0 to 1 (in this study, probe set with p < 0.05 were considered present)
Data table ID_REF VALUE DETECTION P-VALUE AFFX-BioB-5_at
492
0.000753643
AFFX-BioB-M_at
794
9.45E-05
AFFX-BioB-3_at
440
9.45E-05
AFFX-BioC-5_at
1298
8.14E-05
AFFX-BioC-3_at
1528
4.43E-05
AFFX-BioDn-5_at
3317
4.43E-05
AFFX-BioDn-3_at
5535
0.000224668
AFFX-CreX-5_at
14885
5.17E-05
AFFX-CreX-3_at
17719
4.43E-05
AFFX-DapX-5_at
4
0.3684377
AFFX-DapX-M_at
36
0.275146
AFFX-DapX-3_at
21
0.7609373
AFFX-LysX-5_at
7
0.5740377
AFFX-LysX-M_at
9
0.7942677
AFFX-LysX-3_at
16
0.2507957
AFFX-PheX-5_at
2
0.8910214
AFFX-PheX-M_at
3
0.9690236
AFFX-PheX-3_at
15
0.4851099
AFFX-ThrX-5_at
7
0.9634309
AFFX-ThrX-M_at
11
0.686292
52865 1833 Kbytes .Supplementary file Size Download File type/resource GSM297147.CEL.gz
5.1 Mb
(ftp) (http) CEL
Processed data included within Sample table
