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Status
Public on Apr 15, 2010
Title
rhesus hippocampal CA1, 6.50 years old, replicate 9
Sample type
RNA
Source name
Rhesus hippocampus CA1
Organism
Macaca mulatta Characteristics
Female
Extracted molecule
total RNA
Extraction protocol
Standard Affymetrix
Label
Standard Affymetrix
Label protocol
Standard Affymetrix
Hybridization protocol
Standard Affymetrix
Scan protocol
Standard Affymetrix
Description
rhesus hippocampal CA1, 6.50 years old, replicate 9
Data processing
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
Submission date
Jun 05, 2008
Last update date
Mar 15, 2010
Contact name
Eric M Blalock
E-mail(s)
[email protected] Phone
859-323-8033
Organization name
University of Kentucky
Department
Molecular and Biomedical Pharmacology
Lab
Blalock
Street address
800 Rose St.
City
Lexington
State/province
KY
ZIP/Postal code
40475
Country
USA
Platform ID
GPL3535 Series (1)
GSE11697 Young and aged rhesus hippocampal CA1 and DG
Data table header descriptions ID_REF Probe Set
VALUE MAS5-calculated Signal intensity
DETECTION P-VALUE the probability that a probe set is absent, ranging from 0 to 1 (in this study, probe set with p < 0.05 were considered present)
Data table ID_REF VALUE DETECTION P-VALUE AFFX-BioB-5_at
572
0.000753643
AFFX-BioB-M_at
870
7.01E-05
AFFX-BioB-3_at
465
0.000340305
AFFX-BioC-5_at
1372
6.02E-05
AFFX-BioC-3_at
1704
4.43E-05
AFFX-BioDn-5_at
3613
4.43E-05
AFFX-BioDn-3_at
6690
0.000146581
AFFX-CreX-5_at
16463
5.17E-05
AFFX-CreX-3_at
18633
4.43E-05
AFFX-DapX-5_at
33
0.06767845
AFFX-DapX-M_at
16
0.4554125
AFFX-DapX-3_at
22
0.6993936
AFFX-LysX-5_at
10
0.6174008
AFFX-LysX-M_at
7
0.7371734
AFFX-LysX-3_at
14
0.1952664
AFFX-PheX-5_at
3
0.8148693
AFFX-PheX-M_at
5
0.9219982
AFFX-PheX-3_at
15
0.5886198
AFFX-ThrX-5_at
34
0.3406612
AFFX-ThrX-M_at
23
0.5593536
52865 1830 Kbytes .Supplementary file Size Download File type/resource GSM297143.CEL.gz
5.0 Mb
(ftp) (http) CEL
Processed data included within Sample table
