NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM296744 Query DataSets for GSM296744
Status Public on Nov 18, 2008
Title Control_EXP-31_U133B
Sample type RNA
 
Source name Proximal muscle (Quadriceps)
Organism Homo sapiens
Characteristics Gender: Male, Age: 46 years
Mutations: No
Extracted molecule total RNA
Extraction protocol RNAPlus (Qbiogene) extraction of total RNA was performed according to the standard protocols for muscle tissue.
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Affymetrix Protocol, May 5, 2005).
 
Hybridization protocol Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on HG-U133A/B Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Agilent GeneArray Scanner G2500A.
Description Control_EXP-31_U133B
Data processing Arrays were scanned and raw data were normalized using RMA (Robust Multichip Average)
 
Submission date Jun 04, 2008
Last update date Nov 11, 2008
Contact name Amets Saenz
E-mail(s) [email protected]
Phone +34 943 00 70 61
Fax +34 943 00 70 61
Organization name Donostia Hospital
Lab Unidad Experimental
Street address PÂș dr Begiristain s/n
City San Sebastian
State/province Gipuzkoa
ZIP/Postal code 20.014
Country Spain
 
Platform ID GPL97
Series (1)
GSE11681 Expression profiling in LGMD2A muscles

Data table header descriptions
ID_REF
VALUE RMA signal intensity

Data table
ID_REF VALUE
200000_s_at 8.182614845
200001_at 8.289564907
200002_at 10.54795083
200003_s_at 10.2588381
200004_at 9.87786304
200005_at 7.553024587
200006_at 10.79872638
200007_at 9.873534144
200008_s_at 6.576114618
200009_at 8.632500634
200010_at 11.03839053
200011_s_at 5.301198175
200012_x_at 12.05227579
200013_at 10.88133074
200014_s_at 7.527078125
200015_s_at 7.54031822
200016_x_at 10.41169541
200017_at 10.84688932
200018_at 12.00556449
200019_s_at 10.66452328

Total number of rows: 22645

Table truncated, full table size 492 Kbytes.




Supplementary file Size Download File type/resource
GSM296744.CEL.gz 1.8 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap