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Sample GSM296739 Query DataSets for GSM296739
Status Public on Nov 18, 2008
Title Control_EXP-25_U133B
Sample type RNA
 
Source name Proximal muscle (Deltoids)
Organism Homo sapiens
Characteristics Gender: Female, Age: 57 years
Mutations: No
Extracted molecule total RNA
Extraction protocol RNAPlus (Qbiogene) extraction of total RNA was performed according to the standard protocols for muscle tissue.
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Affymetrix Protocol, May 5, 2005).
 
Hybridization protocol Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on HG-U133A/B Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Agilent GeneArray Scanner G2500A.
Description Control_EXP-25_U133B
Data processing Arrays were scanned and raw data were normalized using RMA (Robust Multichip Average)
 
Submission date Jun 04, 2008
Last update date Nov 11, 2008
Contact name Amets Saenz
E-mail(s) [email protected]
Phone +34 943 00 70 61
Fax +34 943 00 70 61
Organization name Donostia Hospital
Lab Unidad Experimental
Street address PÂș dr Begiristain s/n
City San Sebastian
State/province Gipuzkoa
ZIP/Postal code 20.014
Country Spain
 
Platform ID GPL97
Series (1)
GSE11681 Expression profiling in LGMD2A muscles

Data table header descriptions
ID_REF
VALUE RMA signal intensity

Data table
ID_REF VALUE
200000_s_at 7.559473682
200001_at 7.874007285
200002_at 10.42402901
200003_s_at 10.29322609
200004_at 9.618453007
200005_at 7.608971081
200006_at 10.84123401
200007_at 9.762769381
200008_s_at 5.382381459
200009_at 9.009210593
200010_at 10.87269121
200011_s_at 6.113134477
200012_x_at 12.03088542
200013_at 10.77805804
200014_s_at 7.663037238
200015_s_at 7.792560532
200016_x_at 10.04954652
200017_at 10.84586828
200018_at 11.88395337
200019_s_at 10.52437217

Total number of rows: 22645

Table truncated, full table size 492 Kbytes.




Supplementary file Size Download File type/resource
GSM296739.CEL.gz 1.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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