NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM290989 Query DataSets for GSM290989
Status Public on Jul 01, 2008
Title Day2 DV10 #1
Sample type RNA
 
Source name Day2 DV10
Organism Saccharomyces cerevisiae
Characteristics strain: DV10
replicate: 1
time: Day 2 of fermentation
Extracted molecule total RNA
Extraction protocol Hot Phenol Method
Label Biotin
Label protocol Standard Affymetrix Procedure
 
Hybridization protocol Standard Affymetrix Procedure
Scan protocol Standard Affymetrix Procedure
Description N/A
Data processing Standard Affymetrix Procedure, MAS5.0
 
Submission date May 24, 2008
Last update date Aug 04, 2010
Contact name Debra Rossouw
E-mail(s) [email protected]
Organization name University of Stellenbosch
Department Institute for Wine Biotechnology
Lab Yeast
Street address Cnr Neethling and Victoria rd
City Stellenbosch
State/province Western Cape
ZIP/Postal code 7600
Country South Africa
 
Platform ID GPL2529
Series (1)
GSE11651 Transcriptomic profiling of five industrial wine yeast strains at three time points during allcoholic fermentation

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 162.947 P 5.16732e-05
AFFX-BioB-M_at 237.382 P 4.42873e-05
AFFX-BioB-3_at 132.68 P 4.42873e-05
AFFX-BioC-5_at 324.336 P 5.16732e-05
AFFX-BioC-3_at 468.077 P 4.42873e-05
AFFX-BioDn-5_at 1238.89 P 4.42873e-05
AFFX-BioDn-3_at 2225.01 P 4.42873e-05
AFFX-CreX-5_at 6881.33 P 5.16732e-05
AFFX-CreX-3_at 6743.47 P 4.42873e-05
AFFX-DapX-5_at 527.997 P 4.42873e-05
AFFX-DapX-M_at 1049.01 P 4.42873e-05
AFFX-DapX-3_at 1287.41 P 4.42873e-05
AFFX-LysX-5_at 47.6336 P 0.000445901
AFFX-LysX-M_at 88.3252 P 0.000389384
AFFX-LysX-3_at 277.57 P 7.00668e-05
AFFX-PheX-5_at 77.1564 P 4.42873e-05
AFFX-PheX-M_at 117.539 P 4.42873e-05
AFFX-PheX-3_at 163.256 P 5.16732e-05
AFFX-ThrX-5_at 129.966 P 7.00668e-05
AFFX-ThrX-M_at 225.601 P 4.42873e-05

Total number of rows: 10928

Table truncated, full table size 338 Kbytes.




Supplementary file Size Download File type/resource
GSM290989.CEL.gz 986.7 Kb (ftp)(http) CEL
GSM290989.CHP.gz 57.1 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap