NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM275319 Query DataSets for GSM275319
Status Public on Mar 04, 2009
Title Cav1KO 1761
Sample type RNA
 
Source name Cav1KO 1761
Organism Mus musculus
Characteristics Cav1 knockout
Extracted molecule total RNA
Extraction protocol RNA extracted using Trizol, clean up using Qiagen Rneasy Cleanup kit
Label biotin
Label protocol biotinylated cRNA was prepared from 2ug total RNA using Affymetrix One-Cycle Target Labeling Assays
 
Hybridization protocol Fragmented and biotin-labeled 10 ug target in 200ul hybridization cocktail was used for each Affymetrix Mouse Genome 430 20. array
Scan protocol GeneChips were scanned using the Affymetric Gene-Array scanner 3000
Description Gene expression data from mouse heart tissue at 5-6mos of age, male mice, 6 hours fasted
Data processing The data were analyzed with Gene Chip Operating Software (GCOS v1.4) using Affymetrix default analysis settings
 
Submission date Mar 14, 2008
Last update date Aug 28, 2018
Contact name Michael P Lisanti
E-mail(s) [email protected]
Organization name Thomas Jefferson University
Department Cancer Biology
Lab Cancer Biology
Street address 233 S. 10th St BLSB 939
City Philadelphia
State/province PA
ZIP/Postal code 19107
Country USA
 
Platform ID GPL1261
Series (1)
GSE10849 Caveolin-1 Knockout Hearts
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA Normalization by GeneSpring GX v7.3

Data table
ID_REF VALUE
1415670_at 384.06778
1415671_at 845.615
1415672_at 1127.0748
1415673_at 90.60538
1415674_a_at 421.82034
1415675_at 182.14532
1415676_a_at 1933.4596
1415677_at 585.82587
1415678_at 1828.1543
1415679_at 1275.2506
1415680_at 404.82474
1415681_at 799.1102
1415682_at 198.205
1415683_at 1607.8164
1415684_at 247.9722
1415685_at 528.6246
1415686_at 464.9776
1415687_a_at 4139.7
1415688_at 1453.8846
1415689_s_at 229.96864

Total number of rows: 45101

Table truncated, full table size 926 Kbytes.




Supplementary file Size Download File type/resource
GSM275319.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap