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GEO accession:
Sample GSM2740420
Query DataSets for GSM2740420
Status
Public on Dec 31, 2022
Title
H9
Sample type
genomic
Source name
Embryonic stem cells
Organism
Homo sapiens
Characteristics
tissue: Embryonic stem cells
Extracted molecule
genomic DNA
Extraction protocol
Total DNA was isolated by standard procedures
Label
Cy3, Cy5
Label protocol
Standard Illumina labelling protocol
Hybridization protocol
Bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol
Arrays were imaged using High Scan SQ using standard recommended Illumina scanner setting
Data processing
Genome Studio V2011.2
Submission date
Aug 11, 2017
Last update date
Dec 31, 2022
Contact name
IJC Bioinformatics
E-mail(s)
[email protected]
Organization name
Josep Carreras Leukemia Research Institute
Lab
Bioinformatics Unit
Street address
Josep Carreras Building, Ctra de Can Ruti, Camà de les Escoles, s/n
City
Badalona
State/province
Catalonia
ZIP/Postal code
08916
Country
Spain
Platform ID
GPL13534
Series (1)
GSE102542
An epigenetic switch controls the expression of an alternative NR2F2 isoform that unleashes a pro-metastatic program in melanoma
Data table header descriptions
ID_REF
VALUE
Average Beta
Data table
ID_REF
VALUE
cg00000029
0.5842118
cg00000108
0.9003477
cg00000109
0.7839855
cg00000165
0.07010503
cg00000236
0.7762316
cg00000289
0.6577551
cg00000292
0.8004618
cg00000321
0.2041417
cg00000363
0.09357706
cg00000622
0.01754805
cg00000658
0.6835941
cg00000714
0.2219783
cg00000721
0.819981
cg00000734
0.08554485
cg00000769
0.06383175
cg00000807
0.7085065
cg00000884
0.7853543
cg00000905
0.1400176
cg00000924
0.4951682
cg00000948
0.7937966
Total number of rows:
485577
Table truncated, full table size
10046 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record
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