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Sample GSM2740419 Query DataSets for GSM2740419
Status Public on Dec 31, 2022
Title NCC-4
Sample type genomic
 
Source name Facial ganglia-derived neural crest cells
Organism Homo sapiens
Characteristics tissue: Facial ganglia-derived neural crest cells
Extracted molecule genomic DNA
Extraction protocol Total DNA was isolated by standard procedures
Label Cy3, Cy5
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using High Scan SQ using standard recommended Illumina scanner setting
Data processing Genome Studio V2011.2
 
Submission date Aug 11, 2017
Last update date Dec 31, 2022
Contact name IJC Bioinformatics
E-mail(s) [email protected]
Organization name Josep Carreras Leukemia Research Institute
Lab Bioinformatics Unit
Street address Josep Carreras Building, Ctra de Can Ruti, Camí de les Escoles, s/n
City Badalona
State/province Catalonia
ZIP/Postal code 08916
Country Spain
 
Platform ID GPL13534
Series (1)
GSE102542 An epigenetic switch controls the expression of an alternative NR2F2 isoform that unleashes a pro-metastatic program in melanoma

Data table header descriptions
ID_REF
VALUE Average Beta

Data table
ID_REF VALUE
cg00000029 0.528399
cg00000108 0.8293179
cg00000109 0.8273557
cg00000165 0.1469158
cg00000236 0.8327136
cg00000289 0.589285
cg00000292 0.6834278
cg00000321 0.1853396
cg00000363 0.149389
cg00000622 0.04397785
cg00000658 0.7649948
cg00000714 0.1221885
cg00000721 0.9279124
cg00000734 0.06104057
cg00000769 0.09732824
cg00000807 0.7457919
cg00000884 0.7029385
cg00000905 0.09335867
cg00000924 0.5605158
cg00000948 0.8620975

Total number of rows: 485577

Table truncated, full table size 10046 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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