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Sample GSM2712062 Query DataSets for GSM2712062
Status Public on Sep 19, 2017
Title APP-PS1_17months_01
Sample type RNA
 
Source name FACS sorted MG cells
Organism Mus musculus
Characteristics cells: microglia
Extracted molecule total RNA
Extraction protocol none provided by the submitter
Label biotin
Label protocol Refer to the NanoString nCounter Assay System Manual.
 
Hybridization protocol Refer to the NanoString nCounter Assay System Manual.
Scan protocol Refer to the NanoString nCounter Assay System Manual.
Data processing The raw data were normalized using 6 housekeeping genes.
 
Submission date Jul 20, 2017
Last update date Jan 23, 2018
Contact name Oleg Butovsky
E-mail(s) [email protected]
Phone 1-617-525-5313
Organization name Brigham and Women's Hospital, Harvard Medical School
Department Center of Neurologic Diseases
Lab Dr. Oleg Butovsky
Street address 77 Avenue Louis Pasteur, Office 614
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platform ID GPL23811
Series (2)
GSE101686 The TREM2-APOE pathway drives the transcriptional phenotype of dysfunctional microglia in neurodegenerative diseases I
GSE101689 The TREM2-APOE pathway drives the transcriptional phenotype of dysfunctional microglia in neurodegenerative diseases

Data table header descriptions
ID_REF
VALUE quantile normalized signal

Data table
ID_REF VALUE
1 2.44
2 21.98
3 21.98
4 14.65
5 7.33
6 51.29
7 46.4
8 36.64
9 63.5
10 244.24
11 4.88
12 78.16
13 124.56
14 73.27
15 17.1
16 124.56
17 4.88
18 139.21
19 2.44
20 43.96

Total number of rows: 468

Table truncated, full table size 4 Kbytes.




Supplementary file Size Download File type/resource
GSM2712062_20140911_APP-CHIP-A_APP-CHIP-A_04.RCC.gz 5.5 Kb (ftp)(http) RCC
Processed data included within Sample table

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