|
| Status |
Public on Aug 17, 2017 |
| Title |
genomic DNA from WS patient 2 |
| Sample type |
genomic |
| |
|
| Source name |
WS patient 2
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: Whole blood
disease: Werner Syndrome
age: 53
Sex: Female
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA was extracted from whole blood using the Duplica® Blood DNA Kit (Euroclone) on Duplica® Prep Platform (Euroclone).
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to IInfinium MethylationEPIC BeadChip using standard Illumina protocol
|
| Scan protocol |
HiScan SQ scanner (Illumina)
|
| Description |
Whole blood from WS patient
X200477510076_R06C01
|
| Data processing |
Signal intensities files were extracted using the minfi Bioconductor package. Normalization was performed using the Functional Normalization function implemented in minfi.
|
| |
|
| Submission date |
Jul 05, 2017 |
| Last update date |
Jan 23, 2018 |
| Contact name |
Maria Giulia Bacalini |
| E-mail(s) |
[email protected]
|
| Phone |
00390512094748
|
| Organization name |
IRCCS Istituto delle Scienze Neurologiche di Bologna
|
| Department |
Brain Aging Laboratory
|
| Street address |
Via Altura 3
|
| City |
Bologna |
| ZIP/Postal code |
40139 |
| Country |
Italy |
| |
|
| Platform ID |
GPL21145 |
| Series (1) |
| GSE100825 |
Genome-wide DNA methylation analysis in blood cells from patients with Werner Syndrome |
|
