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Sample GSM2674802 Query DataSets for GSM2674802
Status Public on Jul 19, 2017
Title iPSC-CM Line 2 Replicate 2
Sample type RNA
 
Source name Exosome iPS2 R2
Organism Homo sapiens
Characteristics source: Media supernatant
Treatment protocol CMs were grown in RPMI-1640 media supplemented with B27 supplement minus antioxidants for 36 hours, following which the supernatant was removed and collected for exosome isolation.
Growth protocol Day 30 ESC-CMs and iPSC-CMs were cultured routinely
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using Exiqon miRCURY RNA Isolation Kit
Label Cy3
Label protocol Arraystar Flash RNA Labeling Kit was used for sample labeling
 
Hybridization protocol Hybridization was performed in Agilent SureHyb Hybridization Chambers
Scan protocol Slides were scanned with Agilent DNA Microarray Scanner
Description LncRNA profiling of exosomes collected at 36 hours at normoxia
Data processing Data were extracted using Agilent Feature Extraction software
 
Submission date Jun 20, 2017
Last update date Jan 23, 2018
Contact name Joseph Wu
Organization name Stanford University School of Medicine
Street address Stanford University School of Medicine
City Stanford
State/province Carlifornia
ZIP/Postal code 94305
Country USA
 
Platform ID GPL21827
Series (1)
GSE100218 Comparison of non-coding RNAs in exosomes and functional efficacy of human embryonic stem cell- versus induced pluripotent stem cell-derived cardiomyocytes

Data table header descriptions
ID_REF
VALUE Normalized signal intensity

Data table
ID_REF VALUE
GE_BrightCorner 15.655582
DarkCorner 2.6614542
ASHGV40005517 2.3234985
ASHGV40014820 9.884694
ASHGV40030369 2.3234985
ASHGV40013556 2.3234985
ASHGV40009737 2.3234985
ASHGV40005086 2.3234985
ASHGV40021163 8.77183
ASHGV40006648 2.3234985
ASHGV40013297 2.3234985
ASHGV40015652 2.3234985
ASHGV40020595 4.031944
ASHGV40006284 7.0701985
ASHGV40033181 2.3234985
ASHGV40006622 2.3234985
ASHGV40041510 2.3234985
ASHGV40009802 2.3234985
ASHGV40059431 4.1155896
ASHGV40053238 2.3234985

Total number of rows: 61046

Table truncated, full table size 1421 Kbytes.




Supplementary file Size Download File type/resource
GSM2674802_NC8.txt.gz 2.6 Mb (ftp)(http) TXT
Processed data included within Sample table

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