|
| Status |
Public on Feb 29, 2008 |
| Title |
Affymetrix 250k NspI, JW S2 |
| Sample type |
genomic |
| |
|
| Source name |
JW DNA extracted from blood
|
| Organism |
Homo sapiens |
| Characteristics |
Blood from JW
|
| Biomaterial provider |
Blood (2 samples from JW)
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
DNA extracted from blood using FlexiGene DNA kit from Qiagen
|
| Label |
Biotin
|
| Label protocol |
Standard Affymetrix protocol
|
| |
|
| Hybridization protocol |
Standard Affymetrix protocol
|
| Scan protocol |
Gene Chip Scanner 3000 with autoloader and 7G upgrade and GCOS 1.4
|
| Description |
Genotyping data for JW (Affymetrix 500k SNPs)
|
| Data processing |
Affymetrix files (CEL) were processed using GCOS 1.4 software, Genotype calls were made using the BRLMM software from Affymetrix in Gene Chip Genotype Analysis software v 4.0
|
| |
|
| Submission date |
Jan 31, 2008 |
| Last update date |
Mar 04, 2008 |
| Contact name |
Omar Alvi |
| E-mail(s) |
[email protected]
|
| Organization name |
Baylor College of Medicine
|
| Department |
Human Genome Sequencing Center
|
| Street address |
1 Baylor Plaza
|
| City |
Houston |
| State/province |
TX |
| ZIP/Postal code |
77030 |
| Country |
USA |
| |
|
| Platform ID |
GPL3718 |
| Series (1) |
| GSE10668 |
The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing |
|
