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Status
Public on Jan 18, 2009
Title
6Months_8
Sample type
RNA
Source name
rat hippocampal CA1, 6 month old
Organism
Rattus norvegicus Characteristics
Rat hippocampus CA1
Extracted molecule
total RNA
Extraction protocol
Standard Affymetrix
Label
Standard Affymetrix
Label protocol
Standard Affymetrix
Hybridization protocol
Standard Affimetrix
Scan protocol
Affy
Description
rat hippocampal CA1, 6 month old, replicate 8
Data processing
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
Submission date
Dec 20, 2007
Last update date
Dec 08, 2008
Contact name
Eric M Blalock
E-mail(s)
[email protected] Phone
859-323-8033
Organization name
University of Kentucky
Department
Molecular and Biomedical Pharmacology
Lab
Blalock
Street address
800 Rose St.
City
Lexington
State/province
KY
ZIP/Postal code
40475
Country
USA
Platform ID
GPL341 Series (1)
GSE9990 Transcriptional profiles of rodent hippocampal CA1 tissue during aging and cognitive decline
Data table header descriptions ID_REF Probe Set
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
Data table ID_REF VALUE ABS_CALL 1367452_at
3920
P
1367453_at
1638.9
P
1367454_at
1327.4
P
1367455_at
2571.2
P
1367456_at
2666.5
P
1367457_at
1830.5
P
1367458_at
684.7
P
1367459_at
8992.8
P
1367460_at
3964.1
P
1367461_at
940.6
P
1367462_at
2885.8
P
1367463_at
1190.7
P
1367464_at
939.6
P
1367465_at
1838.7
P
1367466_at
1595.8
P
1367467_at
2095.2
P
1367468_at
611.8
P
1367469_at
2530.7
P
1367470_at
2179.4
P
1367471_at
630.9
P
15923 291 Kbytes .Supplementary file Size Download File type/resource GSM252526.CEL.gz
2.5 Mb
(ftp) (http) CEL
Processed data included within Sample table
