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Sample GSM252374 Query DataSets for GSM252374
Status Public on Oct 01, 2008
Title BY4742 -2
Sample type RNA
 
Source name BY4742 wildtype
Organism Saccharomyces cerevisiae
Characteristics BY4742 wildtye
Biomaterial provider Feilong Meng, from Telomere, telomerase and cellular aging group in SIBS
Treatment protocol innoculate in 5ml YPD liquid medium
harvest at mid-log phase
Growth protocol innoculate in 5ml YPD liquid medium
harvest at mid-log phase
Extracted molecule total RNA
Extraction protocol the RNeasy Mini Kit (Qiagen) and on-column DNase Digestion Kit (Qiagen)
Label biotin
Label protocol IVT Labeling Kit Affymetrix
 
Hybridization protocol Hybridization Control Kit Affymetrix
Scan protocol Gene array Scanner3000 Affymetrix
Description performed following Affymetrix standard protocols
Data processing GCOS1.2 Affymetrix
 
Submission date Dec 20, 2007
Last update date Dec 21, 2007
Contact name feilong meng
E-mail(s) [email protected]
Phone 86-21-54921092
Fax 86-21-54921076
Organization name Shanghai institutes for biology sciences
Department SIBCB
Lab telomere and telomerase
Street address 320 yuyang road
City shanghai
ZIP/Postal code 200031
Country China
 
Platform ID GPL2529
Series (1)
GSE9985 sua5D expression profiles

Data table header descriptions
ID_REF
VALUE signal detection
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 109.719 P 0.000195116
AFFX-BioB-M_at 151.574 P 4.42873e-05
AFFX-BioB-3_at 114.731 P 4.42873e-05
AFFX-BioC-5_at 278.269 P 4.42873e-05
AFFX-BioC-3_at 382.878 P 4.42873e-05
AFFX-BioDn-5_at 698.228 P 4.42873e-05
AFFX-BioDn-3_at 1563.37 P 4.42873e-05
AFFX-CreX-5_at 3782.82 P 5.16732e-05
AFFX-CreX-3_at 3805.18 P 4.42873e-05
AFFX-DapX-5_at 326.492 P 4.42873e-05
AFFX-DapX-M_at 453.868 P 7.00668e-05
AFFX-DapX-3_at 471.235 P 6.02111e-05
AFFX-LysX-5_at 24.8715 P 0.000856509
AFFX-LysX-M_at 35.433 P 0.00762003
AFFX-LysX-3_at 96.4037 P 4.42873e-05
AFFX-PheX-5_at 46.0436 P 0.000856509
AFFX-PheX-M_at 58.9999 P 0.000581214
AFFX-PheX-3_at 79.6469 P 0.000195116
AFFX-ThrX-5_at 75.0292 P 0.000146581
AFFX-ThrX-M_at 104.576 P 4.42873e-05

Total number of rows: 10928

Table truncated, full table size 337 Kbytes.




Supplementary file Size Download File type/resource
GSM252374.CEL.gz 1010.9 Kb (ftp)(http) CEL
GSM252374.CHP.gz 56.9 Kb (ftp)(http) CHP
Processed data included within Sample table

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