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Sample GSM248190 Query DataSets for GSM248190
Status Public on Dec 14, 2007
Title 2-27-07 Zn-A T0
Sample type RNA
 
Source name S. aureus strain Newman, mid-log grown in RPMI lacking Zn
Organism Staphylococcus aureus subsp. aureus str. Newman
Characteristics S. aureus strain Newman, mid-log grown in RPMI lacking Zn
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Prep
Label biotin
Label protocol Affymetrix Antisense Prokaryotic
 
Hybridization protocol Affymetrix Antisense Prokaryotic
Scan protocol Affymetrix Antisense Prokaryotic
Description None
Data processing MAS5.0
 
Submission date Dec 10, 2007
Last update date Aug 14, 2011
Contact name Paul M Dunman
E-mail(s) [email protected]
Phone 402 559-7745
Fax 402 559-4077
URL http://dunmanlab.com
Organization name University of Nebraska Medical Center
Department Pathology and Microbiology
Street address 986495 Nebraska Medical Center
City Omaha
State/province NE
ZIP/Postal code 68198-6495
Country USA
 
Platform ID GPL1339
Series (1)
GSE9828 Characterization of Calprotectin treated medium

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL P, M, or A call
DETECTION P-VALUE Detection value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 0.266945 A 0.949786
AFFX-BioB-M_at 0.190784 A 0.981752
AFFX-BioB-3_at 0.181445 A 0.99966
AFFX-BioC-5_at 0.345745 A 0.71234
AFFX-BioC-3_at 0.228282 A 0.99156
AFFX-BioDn-5_at 0.188103 A 0.805147
AFFX-BioDn-3_at 1.76379 A 0.327065
AFFX-CreX-5_at 0.141116 A 0.988681
AFFX-CreX-3_at 0.238929 A 0.94983
AFFX-DapX-5_at 600.078 P 4.42873e-05
AFFX-DapX-M_at 535.907 P 4.42873e-05
AFFX-DapX-3_at 511.184 P 4.42873e-05
AFFX-LysX-5_at 79.2679 P 4.42873e-05
AFFX-LysX-M_at 70.9116 P 5.16732e-05
AFFX-LysX-3_at 81.5064 P 4.42873e-05
AFFX-PheX-5_at 227.395 P 4.42873e-05
AFFX-PheX-M_at 180.693 P 4.42873e-05
AFFX-PheX-3_at 101.28 P 4.42873e-05
AFFX-ThrX-5_at 384.983 P 4.42873e-05
AFFX-ThrX-M_at 279.07 P 4.42246e-05

Total number of rows: 7775

Table truncated, full table size 278 Kbytes.




Supplementary file Size Download File type/resource
GSM248190.CEL.gz 946.3 Kb (ftp)(http) CEL
GSM248190.CHP.gz 57.6 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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